RNA–Protein interactions for RNA: ENST00000568656.5

NUP93-217, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-217ENST00000568656 MCF2L2Q86YR7 1114 aa10.78□□□□□ -0.68
NUP93-217ENST00000568656 RRP36Q96EU6 259 aaKnown RBP10.78□□□□□ -0.68
NUP93-217ENST00000568656 WDR11Q9BZH6 1224 aa10.78□□□□□ -0.68
NUP93-217ENST00000568656 NCOA5Q9HCD5 579 aaKnown RBP10.78□□□□□ -0.68
NUP93-217ENST00000568656 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
NUP93-217ENST00000568656 PXMP2Q9NR77 195 aa10.78□□□□□ -0.68
NUP93-217ENST00000568656 ADD3Q9UEY8 706 aaKnown RBP10.78□□□□□ -0.68
NUP93-217ENST00000568656 PNMA2Q9UL42 364 aa10.78□□□□□ -0.68
NUP93-217ENST00000568656 PHF24Q9UPV7 400 aa10.78□□□□□ -0.68
NUP93-217ENST00000568656 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
NUP93-217ENST00000568656 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.68
NUP93-217ENST00000568656 RBM47A0AV96 593 aaKnown RBP10.77□□□□□ -0.69
NUP93-217ENST00000568656 GCOM1H8Y6P7 765 aaPredicted RBP10.77□□□□□ -0.69
NUP93-217ENST00000568656 MEIS2O14770 477 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 RGS20O76081 388 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 NR3C2P08235 984 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 HMGB1P09429 215 aaKnown RBP10.77□□□□□ -0.69
NUP93-217ENST00000568656 POLR2MP0CAP2 368 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 CALM1P0DP23 149 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 CALM2P0DP24 149 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 CALM3P0DP25 149 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 CAPN2P17655 700 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 CCT2P78371 535 aaKnown RBP10.77□□□□□ -0.69
NUP93-217ENST00000568656 UBE2SQ16763 222 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 RTN1Q16799 776 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 ARHGEF16Q5VV41 709 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 RUFY3Q7L099 469 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 RNF180Q86T96 592 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 TLK2Q86UE8 772 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 DNERQ8NFT8 737 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 NSUN6Q8TEA1 469 aaKnown RBP10.77□□□□□ -0.69
NUP93-217ENST00000568656 PDCD2LQ9BRP1 358 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 UPF3AQ9H1J1 476 aaKnown RBP10.77□□□□□ -0.69
NUP93-217ENST00000568656 VTA1Q9NP79 307 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 RTEL1Q9NZ71 1219 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 CNTNAP5Q8WYK1 1306 aa10.77□□□□□ -0.69
NUP93-217ENST00000568656 ALPK3Q96L96 1907 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 MCM3APO60318 1980 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 SLC34A2O95436 690 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 TXNP10599 105 aaKnown RBP10.76□□□□□ -0.69
NUP93-217ENST00000568656 ITGB8P26012 769 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 SMARCA1P28370 1054 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 PDIA3P30101 505 aaKnown RBP10.76□□□□□ -0.69
NUP93-217ENST00000568656 GNAQP50148 359 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 PSMC6P62333 389 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 SP2Q02086 613 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 GHRHRQ02643 423 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 TLE2Q04725 743 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 STK3Q13188 491 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 PGM5Q15124 567 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 DUSP28Q4G0W2 176 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 WWC2Q6AWC2 1192 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 CCDC62Q6P9F0 684 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 CXCL17Q6UXB2 119 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 HEATR3Q7Z4Q2 680 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 PHKBQ93100 1093 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 VTI1AQ96AJ9 217 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 PGBD1Q96JS3 809 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 LZTS2Q9BRK4 669 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 RBM27Q9P2N5 1060 aaKnown RBP10.76□□□□□ -0.69
NUP93-217ENST00000568656 TELO2Q9Y4R8 837 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 NR2E3Q9Y5X4 410 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 GRIN2DO15399 1336 aa10.76□□□□□ -0.69
NUP93-217ENST00000568656 BAZ2BQ9UIF8 2168 aaKnown RBP10.76□□□□□ -0.69
NUP93-217ENST00000568656 TRIM43BA6NCK2 446 aa10.75□□□□□ -0.69
NUP93-217ENST00000568656 PSMA5P28066 241 aa10.75□□□□□ -0.69
NUP93-217ENST00000568656 METAP2P50579 478 aaKnown RBP eCLIP10.75□□□□□ -0.69
NUP93-217ENST00000568656 MRPS9P82933 396 aaKnown RBP10.75□□□□□ -0.69
NUP93-217ENST00000568656 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
NUP93-217ENST00000568656 STXBP2Q15833 593 aa10.75□□□□□ -0.69
NUP93-217ENST00000568656 FSCN1Q16658 493 aaKnown RBP10.75□□□□□ -0.69
NUP93-217ENST00000568656 VSIG10LQ86VR7 867 aa10.75□□□□□ -0.69
NUP93-217ENST00000568656 TRIM43Q96BQ3 446 aaPredicted RBP10.75□□□□□ -0.69
NUP93-217ENST00000568656 TSEN34Q9BSV6 310 aaKnown RBP10.75□□□□□ -0.69
NUP93-217ENST00000568656 AP5M1Q9H0R1 490 aa10.75□□□□□ -0.69
NUP93-217ENST00000568656 TMEM260Q9NX78 707 aa10.75□□□□□ -0.69
NUP93-217ENST00000568656 SEC63Q9UGP8 760 aaKnown RBP10.75□□□□□ -0.69
NUP93-217ENST00000568656 CYP46A1Q9Y6A2 500 aa10.75□□□□□ -0.69
NUP93-217ENST00000568656 DNAH12Q6ZR08 3092 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 STXBP3O00186 592 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 PQBP1O60828 265 aaKnown RBP10.74□□□□□ -0.69
NUP93-217ENST00000568656 MYL3P08590 195 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 CST5P28325 142 aaPredicted RBP10.74□□□□□ -0.69
NUP93-217ENST00000568656 MAGEA10P43363 369 aaPredicted RBP10.74□□□□□ -0.69
NUP93-217ENST00000568656 NKX3-2P78367 333 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 SNX17Q15036 470 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 NTRK3Q16288 839 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 PKN1Q16512 942 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 C8orf34Q49A92 452 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 HABP4Q5JVS0 413 aaKnown RBP10.74□□□□□ -0.69
NUP93-217ENST00000568656 OR6J1Q8NGC5 347 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 IWS1Q96ST2 819 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 PRO3102Q9H379 93 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 PSTPIP2Q9H939 334 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 PRDM5Q9NQX1 630 aaPredicted RBP10.74□□□□□ -0.69
NUP93-217ENST00000568656 STARD7Q9NQZ5 370 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 PDRG1Q9NUG6 133 aa10.74□□□□□ -0.69
NUP93-217ENST00000568656 RBM28Q9NW13 759 aaKnown RBP10.74□□□□□ -0.69
NUP93-217ENST00000568656 DDX41Q9UJV9 622 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms