RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 AFAP1L1Q8TED9 768 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 PPP1R13LQ8WUF5 828 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 LMCD1Q9NZU5 365 aa13.93□□□□□ -0.18
GTF3C1-209ENST00000568569 SCN10AQ9Y5Y9 1956 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 MUC6Q6W4X9 2439 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 WDR5P61964 334 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 RPS6P62753 249 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 PTGISQ16647 500 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 ZMYM1Q5SVZ6 1142 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 TTBK2Q6IQ55 1244 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 SPRED2Q7Z698 418 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 DNERQ8NFT8 737 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 CLEC4DQ8WXI8 215 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 C11orf16Q9NQ32 467 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 BRWD1Q9NSI6 2320 aa13.92□□□□□ -0.18
GTF3C1-209ENST00000568569 TTC41PQ6P2S7 1318 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 LCHNA4D1U4 455 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 FAM86C2PA6NEL3 165 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 B4DLN1 442 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 PARNO95453 639 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 TXNP10599 105 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 CTDSPL2Q05D32 466 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 SESTD1Q86VW0 696 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 GDPD5Q8WTR4 605 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 COPS5Q92905 334 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 KHSRPQ92945 711 aaKnown RBP eCLIP13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 ZBED2Q9BTP6 218 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 DCTPP1Q9H773 170 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 INCENPQ9NQS7 918 aa13.91□□□□□ -0.18
GTF3C1-209ENST00000568569 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 LCTP09848 1927 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 SCN5AQ14524 2016 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 PI4K2BG5E9Z4 385 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 FOXP2O15409 715 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 ORC4O43929 436 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 TOP1P11387 765 aaKnown RBP13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 CHMP4BP1P59074 171 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 CNKSR3Q6P9H4 555 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 LRRC8DQ7L1W4 858 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 PI4K2BQ8TCG2 481 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 ANAPC4Q9UJX5 808 aa13.9□□□□□ -0.18
GTF3C1-209ENST00000568569 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.19
GTF3C1-209ENST00000568569 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 ARIH2O95376 493 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 GJB5O95377 273 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 SELPP16109 830 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 DEFB103AP81534 67 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 RBL2Q08999 1139 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 GPNMBQ14956 572 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 GDF6Q6KF10 455 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 TMCO2Q7Z6W1 182 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 TGS1Q96RS0 853 aaKnown RBP13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 RAD9AQ99638 391 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 UBE2ZQ9H832 354 aaPredicted RBP13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 SUGCTQ9HAC7 445 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 GPCPD1Q9NPB8 672 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 CD320Q9NPF0 282 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
GTF3C1-209ENST00000568569 TET1Q8NFU7 2136 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 ABHD14A-ACY1A0A1B0GW23 586 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 EFCAB14O75071 495 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 CXCL10P02778 98 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 MMP3P08254 477 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 FGRP09769 529 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 PDHBP11177 359 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 ERVK-21P61565 698 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 CCDC62Q6P9F0 684 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 AFG1LQ8WV93 481 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 CTAGE1Q96RT6 745 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 TMEM47Q9BQJ4 181 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 TOMM22Q9NS69 142 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 RCAN3Q9UKA8 241 aa13.88□□□□□ -0.19
GTF3C1-209ENST00000568569 PRR33A8MZF0 331 aa13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 GH1P01241 217 aa13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 CKBP12277 381 aa13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 LEXMQ3ZCV2 418 aa13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 RRP12Q5JTH9 1297 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 C20orf194Q5TEA3 1177 aa13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 GJD3Q8N144 294 aa13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 DHX38Q92620 1227 aaKnown RBP13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 CRBNQ96SW2 442 aa13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 TCP11L1Q9NUJ3 509 aa13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 GTF2IRD1Q9UHL9 959 aa13.87□□□□□ -0.19
GTF3C1-209ENST00000568569 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 LINC01553A4QN01 128 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 NBNO60934 754 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 CASTP20810 708 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 KCNA5P22460 613 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 ARHGAP1Q07960 439 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 IKBKEQ14164 716 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 VPS53Q5VIR6 699 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 FAM178BQ8IXR5 827 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 RGS22Q8NE09 1264 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 KAT2BQ92831 832 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 KATNAL1Q9BW62 490 aa13.86□□□□□ -0.19
GTF3C1-209ENST00000568569 COL4A4P53420 1690 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms