RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 POLR3EQ9NVU0 708 aa14.98□□□□□ -0.01
TSC2-220ENST00000568238 MAD2L2Q9UI95 211 aa14.98□□□□□ -0.01
TSC2-220ENST00000568238 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
TSC2-220ENST00000568238 GRIN2DO15399 1336 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 KLRF2D3W0D1 207 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 E7EWF7 191 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 IFIT3O14879 490 aaKnown RBP14.97□□□□□ -0.01
TSC2-220ENST00000568238 PSMC6P62333 389 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 TTLL4Q14679 1199 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 BRDTQ58F21 947 aaPredicted RBP14.97□□□□□ -0.01
TSC2-220ENST00000568238 TMEM199Q8N511 208 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 NSUN6Q8TEA1 469 aaKnown RBP14.97□□□□□ -0.01
TSC2-220ENST00000568238 AMNQ9BXJ7 453 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 HIPK3Q9H422 1215 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 COL20A1Q9P218 1284 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 TANC1Q9C0D5 1861 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 CUL9Q8IWT3 2517 aa14.97□□□□□ -0.01
TSC2-220ENST00000568238 PALM3A6NDB9 673 aaPredicted RBP14.96□□□□□ -0.01
TSC2-220ENST00000568238 SLC27A2O14975 620 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 ZBTB5O15062 677 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 MYL3P08590 195 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 TXNP10599 105 aaKnown RBP14.96□□□□□ -0.01
TSC2-220ENST00000568238 PURAQ00577 322 aaKnown RBP14.96□□□□□ -0.01
TSC2-220ENST00000568238 GRM4Q14833 912 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 WTAPQ15007 396 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 CREB3L3Q68CJ9 461 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 STOX1Q6ZVD7 989 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 TBC1D5Q92609 795 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 MTMR8Q96EF0 704 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 FAM161BQ96MY7 647 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 GUCD1Q96NT3 240 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 RMDN3Q96TC7 470 aa14.96□□□□□ -0.01
TSC2-220ENST00000568238 MTG1Q9BT17 334 aaPredicted RBP14.96□□□□□ -0.01
TSC2-220ENST00000568238 GPHNQ9NQX3 736 aaPredicted RBP14.96□□□□□ -0.01
TSC2-220ENST00000568238 CHD7Q9P2D1 2997 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 B4GALT4O60513 344 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 CSF2RAP15509 400 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 CYP2C18P33260 490 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 C8orf34Q49A92 452 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 TMEM67Q5HYA8 995 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 ARHGEF16Q5VV41 709 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 PSRC1Q6PGN9 363 aaPredicted RBP14.95□□□□□ -0.02
TSC2-220ENST00000568238 CHST3Q7LGC8 479 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 HOMER1Q86YM7 354 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 COPS5Q92905 334 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 TAAR1Q96RJ0 339 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 IWS1Q96ST2 819 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.95□□□□□ -0.02
TSC2-220ENST00000568238 TRPV6Q9H1D0 765 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
TSC2-220ENST00000568238 SENP2Q9HC62 589 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 PCDHA1Q9Y5I3 950 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 MYH7BA7E2Y1 1941 aa14.95□□□□□ -0.02
TSC2-220ENST00000568238 KPNA6O60684 536 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 PPP1R11O60927 126 aaPredicted RBP14.94□□□□□ -0.02
TSC2-220ENST00000568238 ARIH2O95376 493 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 CFBP00751 764 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 EIF2AK2P19525 551 aaKnown RBP14.94□□□□□ -0.02
TSC2-220ENST00000568238 NECTIN1Q15223 517 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 STXBP2Q15833 593 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 SEPT14Q6ZU15 432 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 CATIPQ7Z7H3 387 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 MB21D2Q8IYB1 491 aaPredicted RBP14.94□□□□□ -0.02
TSC2-220ENST00000568238 SLC17A8Q8NDX2 589 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 NOC4LQ9BVI4 516 aaKnown RBP14.94□□□□□ -0.02
TSC2-220ENST00000568238 PXMP2Q9NR77 195 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 GBF1Q92538 1859 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 VCANP13611 3396 aa14.94□□□□□ -0.02
TSC2-220ENST00000568238 UMODL1Q5DID0 1318 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 TMEM265A0A087WTH1 108 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 A6NJR5 290 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 OPLAHO14841 1288 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 ACRP10323 421 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 HSD17B4P51659 736 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 ANTXR2P58335 489 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 GHRHRQ02643 423 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 TROAPQ12815 778 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 TRAF1Q13077 416 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 TMEM240Q5SV17 173 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 RNF20Q5VTR2 975 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 CCDC62Q6P9F0 684 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 IL23AQ9NPF7 189 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 TRMT13Q9NUP7 481 aaKnown RBP14.93□□□□□ -0.02
TSC2-220ENST00000568238 SCN5AQ14524 2016 aa14.93□□□□□ -0.02
TSC2-220ENST00000568238 SEC24BO95487 1268 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 GH1P01241 217 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 SUPT20HL2P0C7V6 817 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 ARHGAP1Q07960 439 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 LY6KQ17RY6 165 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 SLC35G1Q2M3R5 365 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 FAM47CQ5HY64 1035 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 NFRKBQ6P4R8 1299 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 C16orf59Q7L2K0 433 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 PIGSQ96S52 555 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 TTYH1Q9H313 450 aaPredicted RBP14.92□□□□□ -0.02
TSC2-220ENST00000568238 SEMA6BQ9H3T3 888 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 MAP3K20Q9NYL2 800 aaKnown RBP14.92□□□□□ -0.02
TSC2-220ENST00000568238 TRANK1O15050 2925 aa14.92□□□□□ -0.02
TSC2-220ENST00000568238 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms