RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 C22orf23Q9BZE7 217 aa15.01□□□□□ -0.01
CNOT1-213ENST00000568158 MAP3K20Q9NYL2 800 aaKnown RBP15.01□□□□□ -0.01
CNOT1-213ENST00000568158 TPCN1Q9ULQ1 816 aa15.01□□□□□ -0.01
CNOT1-213ENST00000568158 MEIS2O14770 477 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 DTNBO60941 627 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 RARBP10826 455 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 EIF2AK2P19525 551 aaKnown RBP15□□□□□ -0.01
CNOT1-213ENST00000568158 EDNRBP24530 442 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 WWC2Q6AWC2 1192 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 TYW1BQ6NUM6 668 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 NOL8Q76FK4 1167 aaKnown RBP15□□□□□ -0.01
CNOT1-213ENST00000568158 HEATR3Q7Z4Q2 680 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 ANKLE1Q8NAG6 615 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 ZFP91Q96JP5 570 aaPredicted RBP15□□□□□ -0.01
CNOT1-213ENST00000568158 KIF2CQ99661 725 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 PXMP2Q9NR77 195 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 BRCA2P51587 3418 aa15□□□□□ -0.01
CNOT1-213ENST00000568158 LOC102724159A0A0B4J2E5 919 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 B4DLN1 442 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 PRPF3O43395 683 aaKnown RBP14.99□□□□□ -0.01
CNOT1-213ENST00000568158 NR3C2P08235 984 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 MYCLP12524 364 aaPredicted RBP14.99□□□□□ -0.01
CNOT1-213ENST00000568158 MRPL12P52815 198 aaKnown RBP14.99□□□□□ -0.01
CNOT1-213ENST00000568158 TNFAIP2Q03169 654 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 PWP2Q15269 919 aaKnown RBP14.99□□□□□ -0.01
CNOT1-213ENST00000568158 LRRC41Q15345 812 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 PKN1Q16512 942 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 IQSEC1Q6DN90 963 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 NECAB2Q7Z6G3 386 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 ARRDC4Q8NCT1 418 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 IWS1Q96ST2 819 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 PSTPIP2Q9H939 334 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 VTA1Q9NP79 307 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 XPNPEP3Q9NQH7 507 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 FRMPD3Q5JV73 1810 aa14.99□□□□□ -0.01
CNOT1-213ENST00000568158 NID2Q14112 1375 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 STXBP3O00186 592 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 DUSP11O75319 330 aaKnown RBP14.98□□□□□ -0.01
CNOT1-213ENST00000568158 IFNAR1P17181 557 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 SMPD1P17405 629 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 STXBP2Q15833 593 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 UBE2SQ16763 222 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 PFKFB3Q16875 520 aaPredicted RBP14.98□□□□□ -0.01
CNOT1-213ENST00000568158 SMARCC2Q8TAQ2 1214 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 CUL5Q93034 780 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 MPHOSPH6Q99547 160 aaKnown RBP14.98□□□□□ -0.01
CNOT1-213ENST00000568158 SLC26A6Q9BXS9 759 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 SENP6Q9GZR1 1112 aaPredicted RBP14.98□□□□□ -0.01
CNOT1-213ENST00000568158 C11orf49Q9H6J7 331 aa14.98□□□□□ -0.01
CNOT1-213ENST00000568158 RBM47A0AV96 593 aaKnown RBP14.97□□□□□ -0.01
CNOT1-213ENST00000568158 MYADML2A6NDP7 307 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 SMCO2A6NFE2 343 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 DYNC1LI2O43237 492 aaPredicted RBP14.97□□□□□ -0.01
CNOT1-213ENST00000568158 ADAMTS4O75173 837 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 RBM25P49756 843 aaKnown RBP14.97□□□□□ -0.01
CNOT1-213ENST00000568158 NAPAP54920 295 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 AKAP17AQ02040 695 aaKnown RBP14.97□□□□□ -0.01
CNOT1-213ENST00000568158 SCRN1Q12765 414 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 PGM5Q15124 567 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 ANKRD1Q15327 319 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 SEPT14Q6ZU15 432 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 IL31RAQ8NI17 732 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 FERMT2Q96AC1 680 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 PDCD2LQ9BRP1 358 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 WDR11Q9BZH6 1224 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 SLKQ9H2G2 1235 aaPredicted RBP14.97□□□□□ -0.01
CNOT1-213ENST00000568158 BARHL2Q9NY43 387 aa14.97□□□□□ -0.01
CNOT1-213ENST00000568158 GNEQ9Y223 722 aaKnown RBP14.97□□□□□ -0.01
CNOT1-213ENST00000568158 PIK3CDO00329 1044 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 DNM1LO00429 736 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 CPLX1O14810 134 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 ADAMTS3O15072 1205 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 PFKFB2O60825 505 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 EIF3JO75822 258 aaKnown RBP14.96□□□□□ -0.01
CNOT1-213ENST00000568158 LARGE1O95461 756 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 COL6A1P12109 1028 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 SCG2P13521 617 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 GJA9P57773 515 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 SSRP1Q08945 709 aaKnown RBP14.96□□□□□ -0.01
CNOT1-213ENST00000568158 ME3Q16798 604 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 VSIG10LQ86VR7 867 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 NECAB1Q8N987 351 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 KLHDC9Q8NEP7 349 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 DPF3Q92784 378 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 COPS5Q92905 334 aa14.96□□□□□ -0.01
CNOT1-213ENST00000568158 RNF26Q9BY78 433 aaPredicted RBP14.96□□□□□ -0.01
CNOT1-213ENST00000568158 SYNRGQ9UMZ2 1314 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 KBTBD13C9JR72 458 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 CTAGE5O15320 804 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 ARIH2O95376 493 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 C6orf222P0C671 652 aaPredicted RBP14.95□□□□□ -0.02
CNOT1-213ENST00000568158 BEX3Q00994 111 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 KCNA10Q16322 511 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 DUSP28Q4G0W2 176 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 RNF180Q86T96 592 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 UPF3AQ9H1J1 476 aaKnown RBP14.95□□□□□ -0.02
CNOT1-213ENST00000568158 RIC8AQ9NPQ8 531 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 TMEM260Q9NX78 707 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 RTEL1Q9NZ71 1219 aa14.95□□□□□ -0.02
CNOT1-213ENST00000568158 PCDHA6Q9UN73 950 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms