RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 KPNA6O60684 536 aa16.47■□□□□ 0.23
SMG1-213ENST00000567737 SELPP16109 830 aa16.47■□□□□ 0.23
SMG1-213ENST00000567737 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
SMG1-213ENST00000567737 IKBKEQ14164 716 aa16.47■□□□□ 0.23
SMG1-213ENST00000567737 SMAD2Q15796 467 aaKnown RBP16.47■□□□□ 0.23
SMG1-213ENST00000567737 PTGISQ16647 500 aa16.47■□□□□ 0.23
SMG1-213ENST00000567737 MS4A3Q96HJ5 214 aa16.47■□□□□ 0.23
SMG1-213ENST00000567737 SAMD11Q96NU1 681 aa16.47■□□□□ 0.23
SMG1-213ENST00000567737 TRERF1Q96PN7 1200 aa16.47■□□□□ 0.23
SMG1-213ENST00000567737 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
SMG1-213ENST00000567737 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
SMG1-213ENST00000567737 NCK2O43639 380 aa16.46■□□□□ 0.23
SMG1-213ENST00000567737 ALAS1P13196 640 aa16.46■□□□□ 0.23
SMG1-213ENST00000567737 GPNMBQ14956 572 aa16.46■□□□□ 0.23
SMG1-213ENST00000567737 COL19A1Q14993 1142 aa16.46■□□□□ 0.23
SMG1-213ENST00000567737 AACSQ86V21 672 aa16.46■□□□□ 0.23
SMG1-213ENST00000567737 ISY1Q9ULR0 285 aaKnown RBP16.46■□□□□ 0.23
SMG1-213ENST00000567737 GOLIM4O00461 696 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 CXCL10P02778 98 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 PSEN1P49768 467 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 CHMP4BP1P59074 171 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 GPM6BQ13491 265 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 EPC2Q52LR7 807 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 CTR9Q6PD62 1173 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 RPAINQ86UA6 219 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
SMG1-213ENST00000567737 FBXL6Q8N531 539 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 MORC4Q8TE76 937 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
SMG1-213ENST00000567737 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 CYP39A1Q9NYL5 469 aa16.45■□□□□ 0.22
SMG1-213ENST00000567737 BAZ2AQ9UIF9 1905 aaKnown RBP16.45■□□□□ 0.22
SMG1-213ENST00000567737 TECTAO75443 2155 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 SCN10AQ9Y5Y9 1956 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 H3BNC9 293 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 STXBP3O00186 592 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 STK25O00506 426 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 MBTPS2O43462 519 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 NBNO60934 754 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 STAT2P52630 851 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 CLUL1Q15846 466 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 BBXQ8WY36 941 aaPredicted RBP16.44■□□□□ 0.22
SMG1-213ENST00000567737 ARPP21Q9UBL0 812 aaPredicted RBP16.44■□□□□ 0.22
SMG1-213ENST00000567737 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
SMG1-213ENST00000567737 TMEM232C9JQI7 657 aa16.43■□□□□ 0.22
SMG1-213ENST00000567737 NKRFO15226 690 aaKnown RBP eCLIP16.43■□□□□ 0.221e-7■■□□□ 13.5
SMG1-213ENST00000567737 IPO8O15397 1037 aaKnown RBP16.43■□□□□ 0.22
SMG1-213ENST00000567737 AMHP03971 560 aa16.43■□□□□ 0.22
SMG1-213ENST00000567737 BMP3P12645 472 aa16.43■□□□□ 0.22
SMG1-213ENST00000567737 RASA1P20936 1047 aa16.43■□□□□ 0.22
SMG1-213ENST00000567737 RARSP54136 660 aaKnown RBP16.43■□□□□ 0.22
SMG1-213ENST00000567737 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
SMG1-213ENST00000567737 PPP2R5BQ15173 497 aa16.43■□□□□ 0.22
SMG1-213ENST00000567737 TCTN1Q2MV58 587 aa16.43■□□□□ 0.22
SMG1-213ENST00000567737 NSMFQ6X4W1 530 aa16.43■□□□□ 0.22
SMG1-213ENST00000567737 GMCL1P1Q8NEA9 526 aa16.43■□□□□ 0.22
SMG1-213ENST00000567737 ADD3Q9UEY8 706 aaKnown RBP16.43■□□□□ 0.22
SMG1-213ENST00000567737 SYNPO2Q9UMS6 1093 aa16.43■□□□□ 0.22
SMG1-213ENST00000567737 GREB1LQ9C091 1923 aaPredicted RBP16.43■□□□□ 0.22
SMG1-213ENST00000567737 TRIM27P14373 513 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 LTBRP36941 435 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 SMAD4Q13485 552 aaKnown RBP16.42■□□□□ 0.22
SMG1-213ENST00000567737 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 SLFN13Q68D06 897 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 FAM160B2Q86V87 743 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 MYOCDQ8IZQ8 938 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 STK11IPQ8N1F8 1099 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 LRRC47Q8N1G4 583 aaKnown RBP16.42■□□□□ 0.22
SMG1-213ENST00000567737 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
SMG1-213ENST00000567737 CHURC1Q8WUH1 139 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 PURBQ96QR8 312 aaKnown RBP16.42■□□□□ 0.22
SMG1-213ENST00000567737 TRIOO75962 3097 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 C5orf42Q9H799 3197 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 ZBED9Q6R2W3 1325 aa16.42■□□□□ 0.22
SMG1-213ENST00000567737 RBM47A0AV96 593 aaKnown RBP16.41■□□□□ 0.22
SMG1-213ENST00000567737 A6NJR5 290 aa16.41■□□□□ 0.22
SMG1-213ENST00000567737 CKBP12277 381 aa16.41■□□□□ 0.22
SMG1-213ENST00000567737 ADD2P35612 726 aa16.41■□□□□ 0.22
SMG1-213ENST00000567737 ALDH5A1P51649 535 aaPredicted RBP16.41■□□□□ 0.22
SMG1-213ENST00000567737 HTRA4P83105 476 aaPredicted RBP16.41■□□□□ 0.22
SMG1-213ENST00000567737 ZXDAP98168 799 aa16.41■□□□□ 0.22
SMG1-213ENST00000567737 RBL2Q08999 1139 aa16.41■□□□□ 0.22
SMG1-213ENST00000567737 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
SMG1-213ENST00000567737 GDF6Q6KF10 455 aaPredicted RBP16.41■□□□□ 0.22
SMG1-213ENST00000567737 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMG1-213ENST00000567737 MKL1Q969V6 931 aa16.41■□□□□ 0.22
SMG1-213ENST00000567737 CLUAP1Q96AJ1 413 aa16.41■□□□□ 0.22
SMG1-213ENST00000567737 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMG1-213ENST00000567737 LOC102724159A0A0B4J2E5 919 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 PROB1E7EW31 1015 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 TTLL1O95922 423 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 ID4P47928 161 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 PWP2Q15269 919 aaKnown RBP16.4■□□□□ 0.22
SMG1-213ENST00000567737 CTC1Q2NKJ3 1217 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 SESTD1Q86VW0 696 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 FBXO11Q86XK2 927 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 TMEM192Q8IY95 271 aa16.4■□□□□ 0.22
SMG1-213ENST00000567737 TRMT2AQ8IZ69 625 aaKnown RBP16.4■□□□□ 0.22
SMG1-213ENST00000567737 DHX38Q92620 1227 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms