RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 LIG3P49916 1009 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 E2F4Q16254 413 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 ZNF658Q5TYW1 1059 aaPredicted RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 MSL1Q68DK7 614 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 WDR59Q6PJI9 974 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 USP17L2Q6R6M4 530 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 SH3RF1Q7Z6J0 888 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 SH2D3CQ8N5H7 860 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 GOLGA5Q8TBA6 731 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 EXOC4Q96A65 974 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 NHEJ1Q9H9Q4 299 aaPredicted RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 DCP1AQ9NPI6 582 aaPredicted RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 DMGDHQ9UI17 866 aaKnown RBP7.22□□□□□ -1.25
GINS3-206ENST00000567143 CAPN6Q9Y6Q1 641 aa7.22□□□□□ -1.25
GINS3-206ENST00000567143 CCT5P48643 541 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 STIM1Q13586 685 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 ANKRD40Q6AI12 368 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 RRAGAQ7L523 313 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 SRLQ86TD4 932 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 TGFBRAP1Q8WUH2 860 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 FAM84BQ96KN1 310 aaPredicted RBP7.21□□□□□ -1.26
GINS3-206ENST00000567143 CNOT6LQ96LI5 555 aaKnown RBP7.21□□□□□ -1.26
GINS3-206ENST00000567143 NAA15Q9BXJ9 866 aaKnown RBP7.21□□□□□ -1.26
GINS3-206ENST00000567143 DISC1Q9NRI5 854 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 RWDD2AQ9UIY3 292 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 MARCH6O60337 910 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 TSPY3P0CV98 308 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 TSPY8P0CW00 308 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 GUCY2FP51841 1108 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 NAPAP54920 295 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 NAALADL2Q58DX5 795 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 CCDC181Q5TID7 509 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 LRRC1Q9BTT6 524 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 UBXN6Q9BZV1 441 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 EXOC1Q9NV70 894 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 TMEM260Q9NX78 707 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 ANKIB1Q9P2G1 1089 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 MYH8P13535 1937 aa7.21□□□□□ -1.26
GINS3-206ENST00000567143 FRMPD2Q68DX3 1309 aaPredicted RBP7.21□□□□□ -1.26
GINS3-206ENST00000567143 COL4A5P29400 1685 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 ECM29Q5VYK3 1845 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 F8W031 263 aaPredicted RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 BACH1O14867 736 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 KRT86O43790 486 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 KIF5AQ12840 1032 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 SPA17Q15506 151 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 GRIK5Q16478 980 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 WHAMMP3Q1A5X7 153 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 SAMD1Q6SPF0 538 aaPredicted RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 LRRC31Q6UY01 552 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 NELFCDQ8IXH7 590 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 MICALL1Q8N3F8 863 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 AFAP1L1Q8TED9 768 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 NLRP3Q96P20 1036 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.2□□□□□ -1.26
GINS3-206ENST00000567143 SELENOOQ9BVL4 669 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 PPP1R1BQ9UD71 204 aaPredicted RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 POTEMA6NI47 508 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 EIF3CLB5ME19 914 aaKnown RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 FKBP1AP62942 108 aaKnown RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 RASSF7Q02833 373 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 SPAG1Q07617 926 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 EIF3CQ99613 913 aaKnown RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 IFIH1Q9BYX4 1025 aaKnown RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 BSDC1Q9NW68 430 aaPredicted RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 LIMA1Q9UHB6 759 aaKnown RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 MINPP1Q9UNW1 487 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 GOLGA6BA6NDN3 693 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 LGALS16A8MUM7 142 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 TULP2O00295 520 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 FTCDO95954 541 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 AMPD2Q01433 879 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 GFPT1Q06210 699 aaPredicted RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 CABP7Q86V35 215 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 ADSSL1Q8N142 457 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 L3MBTL3Q96JM7 780 aaPredicted RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 ZNF512BQ96KM6 892 aaPredicted RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 CRNKL1Q9BZJ0 848 aaKnown RBP7.2□□□□□ -1.26
GINS3-206ENST00000567143 TCP11L1Q9NUJ3 509 aa7.2□□□□□ -1.26
GINS3-206ENST00000567143 MYH2Q9UKX2 1941 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 MYH15Q9Y2K3 1946 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 SPEF2Q9C093 1822 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 GOLGA6CA6NDK9 693 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 ZNF263O14978 683 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 ATP8B1O43520 1251 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 CYTH3O43739 400 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 SYF2O95926 243 aaKnown RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 KRT14P02533 472 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 GOLGA6DP0CG33 693 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 EIF4A3P38919 411 aaKnown RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 USP14P54578 494 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 TRADDQ15628 312 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 PFKFB3Q16875 520 aaPredicted RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 CACNA2D4Q7Z3S7 1137 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 ZNF444Q8N0Y2 327 aaPredicted RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 MSANTD4Q8NCY6 345 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 SUPT20HQ8NEM7 779 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 TNFRSF25Q93038 417 aa7.19□□□□□ -1.26
GINS3-206ENST00000567143 SECISBP2LQ93073 1101 aaKnown RBP7.19□□□□□ -1.26
GINS3-206ENST00000567143 COA7Q96BR5 231 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms