RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 SYNRGQ9UMZ2 1314 aa8.29□□□□□ -1.08
SIN3A-207ENST00000566640 PATL2C9JE40 543 aaKnown RBP8.28□□□□□ -1.08
SIN3A-207ENST00000566640 ADCY6O43306 1168 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 CLTBP09497 229 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 GSPT1P15170 499 aaKnown RBP8.28□□□□□ -1.08
SIN3A-207ENST00000566640 CST5P28325 142 aaPredicted RBP8.28□□□□□ -1.08
SIN3A-207ENST00000566640 NKX3-2P78367 333 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 FAAP100Q0VG06 881 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 RRP12Q5JTH9 1297 aaKnown RBP8.28□□□□□ -1.08
SIN3A-207ENST00000566640 ZNF697Q5TEC3 545 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 SNRNP48Q6IEG0 339 aaKnown RBP8.28□□□□□ -1.08
SIN3A-207ENST00000566640 CWC27Q6UX04 472 aaKnown RBP8.28□□□□□ -1.08
SIN3A-207ENST00000566640 LRRC47Q8N1G4 583 aaKnown RBP8.28□□□□□ -1.08
SIN3A-207ENST00000566640 CEP95Q96GE4 821 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 FAM161BQ96MY7 647 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 TOX2Q96NM4 488 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 TTYH1Q9H313 450 aaPredicted RBP8.28□□□□□ -1.08
SIN3A-207ENST00000566640 SLC38A10Q9HBR0 1119 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 MTMR4Q9NYA4 1195 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 CLIP2Q9UDT6 1046 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 MTMR7Q9Y216 660 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 CNPY2Q9Y2B0 182 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 LTBP2Q14767 1821 aa8.28□□□□□ -1.08
SIN3A-207ENST00000566640 MYADML2A6NDP7 307 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 DUSP11O75319 330 aaKnown RBP8.27□□□□□ -1.09
SIN3A-207ENST00000566640 S1PR4O95977 384 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 TSPY3P0CV98 308 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 TSPY8P0CW00 308 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
SIN3A-207ENST00000566640 JUNDP17535 347 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 SDSP20132 328 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 ACLYP53396 1101 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 OAZ1P54368 228 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 PDE4BQ07343 736 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 MCMDC2Q4G0Z9 681 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 TTC22Q5TAA0 569 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 RASGRP2Q7LDG7 609 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.27□□□□□ -1.09
SIN3A-207ENST00000566640 NEDD1Q8NHV4 660 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 CDX2Q99626 313 aaPredicted RBP8.27□□□□□ -1.09
SIN3A-207ENST00000566640 KATNBL1Q9H079 304 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 SEMA6BQ9H3T3 888 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 RAVER2Q9HCJ3 691 aaKnown RBP8.27□□□□□ -1.09
SIN3A-207ENST00000566640 INCENPQ9NQS7 918 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 HELLSQ9NRZ9 838 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 FEM1BQ9UK73 627 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 TBX21Q9UL17 535 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 FAM184BQ9ULE4 1060 aa8.27□□□□□ -1.09
SIN3A-207ENST00000566640 SPTBN5Q9NRC6 3674 aaKnown RBP8.27□□□□□ -1.09
SIN3A-207ENST00000566640 TMEM265A0A087WTH1 108 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 TSPY2A6NKD2 308 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 NRG2O14511 850 aaPredicted RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 CTAGE5O15320 804 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 RANBP6O60518 1105 aaKnown RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 NMT2O60551 498 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 PQBP1O60828 265 aaKnown RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 ZBED4O75132 1171 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 DXOO77932 396 aaKnown RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 TTLL1O95922 423 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 SLC3A2P08195 630 aaKnown RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 HSPD1P10809 573 aaKnown RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 CDK7P50613 346 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 ACVR2BQ13705 512 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 KCNA10Q16322 511 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 ARMCX2Q7L311 632 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 TBC1D10CQ8IV04 446 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 ZNF444Q8N0Y2 327 aaPredicted RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 CPXCR1Q8N123 301 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 CHST13Q8NET6 341 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 NUP133Q8WUM0 1156 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 LRRN4Q8WUT4 740 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 KIFC2Q96AC6 838 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 DDX11Q96FC9 970 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 GMCL1Q96IK5 515 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 COL25A1Q9BXS0 654 aaPredicted RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 UPF3AQ9H1J1 476 aaKnown RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 IL25Q9H293 177 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 OSBPL3Q9H4L5 887 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 ZNF287Q9HBT7 754 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 STARD7Q9NQZ5 370 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 FBXO40Q9UH90 709 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 ZHX1Q9UKY1 873 aaPredicted RBP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.26□□□□□ -1.09
SIN3A-207ENST00000566640 ZNF536O15090 1300 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 ELP1O95163 1332 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 NEDD4P46934 1319 aa8.26□□□□□ -1.09
SIN3A-207ENST00000566640 PLA2G6O60733 806 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 NEFLP07196 543 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 BMP3P12645 472 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 RAG1P15918 1043 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 NOVP48745 357 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 MMP16P51512 607 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 GJA9P57773 515 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 TFAP4Q01664 338 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 FPGSQ05932 587 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 SLFN13Q68D06 897 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 LYPD8Q6UX82 237 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
SIN3A-207ENST00000566640 FAM133AQ8N9E0 248 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms