RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 MKNK2Q9HBH9 465 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 AP5S1Q9NUS5 200 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 ZSWIM5Q9P217 1185 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 COQ6Q9Y2Z9 468 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 U3KQE9 123 aa6.8□□□□□ -1.32
CNOT1-209ENST00000566240 ZNF891A8MT65 544 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-209ENST00000566240 H3BS24 57 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 M0R2C6 588 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 PYGMP11217 842 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 NFE2Q16621 373 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-209ENST00000566240 INF2Q27J81 1249 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 KIZQ2M2Z5 673 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 GAB4Q2WGN9 574 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 RNF111Q6ZNA4 994 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 PRR23CQ6ZRP0 262 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 SPACA3Q8IXA5 215 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 FAM181AQ8N9Y4 354 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 UBE2FQ969M7 185 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 MTMR8Q96EF0 704 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 PTCHD1Q96NR3 888 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 CCDC8Q9H0W5 538 aaPredicted RBP6.79□□□□□ -1.32
CNOT1-209ENST00000566240 PCDHA2Q9Y5H9 948 aa6.79□□□□□ -1.32
CNOT1-209ENST00000566240 TRAF5O00463 557 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 FGF10O15520 208 aaPredicted RBP6.78□□□□□ -1.32
CNOT1-209ENST00000566240 FKTNO75072 461 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 IL2P60568 153 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 DSG1Q02413 1049 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 MCL1Q07820 350 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 THAP5Q7Z6K1 395 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 CPNE8Q86YQ8 564 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 SMC1BQ8NDV3 1235 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 CDADC1Q9BWV3 514 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 CELF4Q9BZC1 486 aaKnown RBP6.78□□□□□ -1.32
CNOT1-209ENST00000566240 TRIM8Q9BZR9 551 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 CABP5Q9NP86 173 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 DUSP13Q9UII6 198 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 APOBEC2Q9Y235 224 aaKnown RBP6.78□□□□□ -1.32
CNOT1-209ENST00000566240 ZKSCAN5Q9Y2L8 839 aa6.78□□□□□ -1.32
CNOT1-209ENST00000566240 WDR64B1ANS9 1081 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 WNT9AO14904 365 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 GAS7O60861 476 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 FKBP9O95302 570 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 TBC1D8O95759 1140 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 SOD2P04179 222 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 CEACAM5P06731 702 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 ENDOUP21128 410 aaKnown RBP6.77□□□□□ -1.33
CNOT1-209ENST00000566240 ADCYAP1R1P41586 468 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 CLCN7P51798 805 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 NFIAQ12857 509 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 TMEM177Q53S58 311 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 FAM47CQ5HY64 1035 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 MBLAC2Q68D91 279 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 FKBP9P1Q75LS8 142 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 CNTD1Q8N815 330 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 COG1Q8WTW3 980 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 TSR2Q969E8 191 aaKnown RBP6.77□□□□□ -1.33
CNOT1-209ENST00000566240 METTL22Q9BUU2 404 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-209ENST00000566240 OSBPL1AQ9BXW6 950 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 IPPKQ9H8X2 491 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 CRTAC1Q9NQ79 661 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 SEMA3GQ9NS98 782 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 ATG3Q9NT62 314 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 B4GALT6Q9UBX8 382 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 PLAGL2Q9UPG8 496 aa6.77□□□□□ -1.33
CNOT1-209ENST00000566240 CCDC66A2RUB6 948 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 FAM47E-STBD1D6RA91 191 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 GSTA4O15217 222 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 MYO1BO43795 1136 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 LTKP29376 864 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 DNM2P50570 870 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 NEK2P51955 445 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 ST5P78524 1137 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 C16orf59Q7L2K0 433 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 OVCH1Q7RTY7 1134 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 TMPRSS7Q7RTY8 843 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 NAT16Q8N8M0 369 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 CHST14Q8NCH0 376 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 FBXW5Q969U6 566 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 GPR101Q96P66 508 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-209ENST00000566240 SMAD5Q99717 465 aaKnown RBP6.76□□□□□ -1.33
CNOT1-209ENST00000566240 DBNDD2Q9BQY9 259 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 CHMP4AQ9BY43 222 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 LRRC4CQ9HCJ2 640 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 GEMIN8Q9NWZ8 242 aaKnown RBP6.76□□□□□ -1.33
CNOT1-209ENST00000566240 PCDHA11Q9Y5I1 949 aa6.76□□□□□ -1.33
CNOT1-209ENST00000566240 TIMM13Q9Y5L4 95 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-209ENST00000566240 TSPAN6O43657 245 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 GRK2P25098 689 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 GRK3P35626 688 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 LSSP48449 732 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 RAB27AP51159 221 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 MECP2P51608 486 aaKnown RBP6.75□□□□□ -1.33
CNOT1-209ENST00000566240 LSAMPQ13449 338 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 LAPTM5Q13571 262 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 PPP2R5AQ15172 486 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 PRSS36Q5K4E3 855 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 ARTNQ5T4W7 220 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 SYDE2Q5VT97 1194 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 ZPBP2Q6X784 338 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms