RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 HSD17B7P56937 341 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 CACNB2Q08289 660 aaPredicted RBP12.2□□□□□ -0.46
UBFD1-205ENST00000566136 PDE1CQ14123 709 aaPredicted RBP12.2□□□□□ -0.46
UBFD1-205ENST00000566136 FXNQ16595 210 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 ABCG4Q9H172 646 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 GYS1P13807 737 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
UBFD1-205ENST00000566136 NKD1Q969G9 470 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 RSRP1Q9BUV0 290 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 PHAXQ9H814 394 aaKnown RBP12.2□□□□□ -0.46
UBFD1-205ENST00000566136 ANKEF1Q9NU02 776 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 CHMP5Q9NZZ3 219 aa12.2□□□□□ -0.46
UBFD1-205ENST00000566136 KCNQ3O43525 872 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
UBFD1-205ENST00000566136 PHC3Q8NDX5 983 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 ZFPM2Q8WW38 1151 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 ATP6V1E2Q96A05 226 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 KLRG1Q96E93 195 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 ANO9A1A5B4 782 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 H3BRJ5 948 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 KCNA2P16389 499 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 POLR2BP30876 1174 aaKnown RBP12.19□□□□□ -0.46
UBFD1-205ENST00000566136 EIF5P55010 431 aaKnown RBP12.19□□□□□ -0.46
UBFD1-205ENST00000566136 PKN2Q16513 984 aaKnown RBP12.19□□□□□ -0.46
UBFD1-205ENST00000566136 MINDY4Q4G0A6 757 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
UBFD1-205ENST00000566136 VMP1Q96GC9 406 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 DESI2Q9BSY9 194 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 SPON1Q9HCB6 807 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 IFT80Q9P2H3 777 aaPredicted RBP12.19□□□□□ -0.46
UBFD1-205ENST00000566136 GIMAP2Q9UG22 337 aa12.19□□□□□ -0.46
UBFD1-205ENST00000566136 PNMA6EA0A0J9YXQ4 647 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 KCNC4Q03721 635 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 GRM2Q14416 872 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 MZT2BQ6NZ67 158 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 ZNF530Q6P9A1 599 aaPredicted RBP12.18□□□□□ -0.46
UBFD1-205ENST00000566136 MPRIPQ6WCQ1 1025 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 MAP4K5Q9Y4K4 846 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 PARP3Q9Y6F1 533 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 MEGF6O75095 1541 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 M0R2N6 131 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 RAD52P43351 418 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 ZNF252P-AS1Q0IIN9 211 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 SNAP47Q5SQN1 464 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 BRICD5Q6PL45 260 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 NECAB2Q7Z6G3 386 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 HEATR4Q86WZ0 1026 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 SLC9A9Q8IVB4 645 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 STK32BQ9NY57 414 aa12.18□□□□□ -0.46
UBFD1-205ENST00000566136 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
UBFD1-205ENST00000566136 UPK3BL1B0FP48 263 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 UPK3BL2E5RIL1 263 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 M0R2C6 588 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 AHCYL1O43865 530 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 ANXA1P04083 346 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 VPS53Q5VIR6 699 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 ESYT1Q9BSJ8 1104 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 NOC4LQ9BVI4 516 aaKnown RBP12.17□□□□□ -0.46
UBFD1-205ENST00000566136 PPP1R9AQ9ULJ8 1098 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 BTAF1O14981 1849 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 CEMIPQ8WUJ3 1361 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 ZBTB7AO95365 584 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 SLC34A2O95436 690 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 MPP1Q00013 466 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 GBX1Q14549 363 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 SLC15A2Q16348 729 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 SLX1AQ9BQ83 275 aa12.17□□□□□ -0.46
UBFD1-205ENST00000566136 GNAI3P08754 354 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 IL6STP40189 918 aaPredicted RBP12.16□□□□□ -0.46
UBFD1-205ENST00000566136 FXR1P51114 621 aaKnown RBP eCLIP12.16□□□□□ -0.46
UBFD1-205ENST00000566136 GDF10P55107 478 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 EIF4A1P60842 406 aaKnown RBP12.16□□□□□ -0.46
UBFD1-205ENST00000566136 CAMK2GQ13555 558 aaPredicted RBP12.16□□□□□ -0.46
UBFD1-205ENST00000566136 CMIPQ8IY22 773 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 SLFN12Q8IYM2 578 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 SNRNP27Q8WVK2 155 aaKnown RBP12.16□□□□□ -0.46
UBFD1-205ENST00000566136 CENPTQ96BT3 561 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 SYTL4Q96C24 671 aaPredicted RBP12.16□□□□□ -0.46
UBFD1-205ENST00000566136 LATS2Q9NRM7 1088 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 DNM3Q9UQ16 869 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 GTPBP10A4D1E9 387 aaKnown RBP12.16□□□□□ -0.46
UBFD1-205ENST00000566136 SLC10A6Q3KNW5 377 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 MORN1Q5T089 497 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 ZNF830Q96NB3 372 aaPredicted RBP12.16□□□□□ -0.46
UBFD1-205ENST00000566136 CASZ1Q86V15 1759 aa12.16□□□□□ -0.46
UBFD1-205ENST00000566136 PDE1AP54750 535 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 TEFQ10587 303 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 ASIC2Q16515 512 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 SLC10A5Q5PT55 438 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 TPTE2Q6XPS3 522 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 TAB3Q8N5C8 712 aaPredicted RBP12.15□□□□□ -0.46
UBFD1-205ENST00000566136 USP44Q9H0E7 712 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 MAN1C1Q9NR34 630 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 RAB6BQ9NRW1 208 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 BABAM1Q9NWV8 329 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 CACNA1FO60840 1977 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 PRKD3O94806 890 aa12.15□□□□□ -0.46
UBFD1-205ENST00000566136 SLC4A1P02730 911 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms