RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 RASGRP4Q8TDF6 673 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 OPTNQ96CV9 577 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 PCDHB6Q9Y5E3 794 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 TRPM7Q96QT4 1865 aa10.65□□□□□ -0.7
CNEP1R1-206ENST00000565556 A0A1W2PQ27 194 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 A0A1W2PQ64 194 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 A0A1W2PQD8 194 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 PIK3CDO00329 1044 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 VWA5AO00534 786 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 IRF6O14896 467 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 ADAMTS3O15072 1205 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 CELF2O95319 508 aaKnown RBP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 DSG3P32926 999 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 OAZ1P54368 228 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 FAM160A1Q05DH4 1040 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 DHX8Q14562 1220 aaKnown RBP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 PTPN14Q15678 1187 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 NOM1Q5C9Z4 860 aaKnown RBP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 JAKMIP3Q5VZ66 844 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 NEK8Q86SG6 692 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 NAP1L4Q99733 375 aaKnown RBP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 NAT10Q9H0A0 1025 aaKnown RBP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 KCND1Q9NSA2 647 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 CCPG1Q9ULG6 757 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 PCDHA7Q9UN72 937 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 ADAMTS5Q9UNA0 930 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 RLFQ13129 1914 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 CUTAO60888 179 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 HOXA7P31268 230 aaPredicted RBP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 PABPC4Q13310 644 aaKnown RBP eCLIP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 SNAPC2Q13487 334 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 ZNF174Q15697 407 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 INF2Q27J81 1249 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 NYAP1Q6ZVC0 841 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 KRI1Q8N9T8 703 aaKnown RBP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 ZNF397Q8NF99 534 aaPredicted RBP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 TMEM260Q9NX78 707 aa10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 DDX41Q9UJV9 622 aaKnown RBP10.64□□□□□ -0.71
CNEP1R1-206ENST00000565556 ZNF536O15090 1300 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 LAD1O00515 517 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 MEIS2O14770 477 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 SKILP12757 684 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 MARCKSP29966 332 aaPredicted RBP10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 UBE2SQ16763 222 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 MCF2L2Q86YR7 1114 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 TBCKQ8TEA7 893 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 ZNF592Q92610 1267 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 FERMT2Q96AC1 680 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 ATG4CQ96DT6 458 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 MAF1Q9H063 256 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 EHMT1Q9H9B1 1298 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 MAP3K20Q9NYL2 800 aaKnown RBP10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 AGTPBP1Q9UPW5 1226 aa10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 SRPRBQ9Y5M8 271 aaKnown RBP10.63□□□□□ -0.71
CNEP1R1-206ENST00000565556 SMCHD1A6NHR9 2005 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 SPDYE3A6NKU9 549 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 GCOM1H8Y6P7 765 aaPredicted RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 ATP2A1O14983 1001 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 POLR2MP0CAP2 368 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 GCFC2P16383 781 aaKnown RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 PTPREP23469 700 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 CMA1P23946 247 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 MCM7P33993 719 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 USP11P51784 963 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 CCZ1BP86790 482 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 CCZ1P86791 482 aaPredicted RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 ATP2C1P98194 919 aaPredicted RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 FMR1Q06787 632 aaKnown RBP eCLIP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 PTGDRQ13258 359 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 TKFCQ3LXA3 575 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 AXDND1Q5T1B0 1012 aaPredicted RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 TAF3Q5VWG9 929 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 ARL6IP4Q66PJ3 421 aaKnown RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 USP17L6PQ6QN14 398 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 DHX40Q8IX18 779 aaKnown RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 CPXCR1Q8N123 301 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 MB21D1Q8N884 522 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 ZNF579Q8NAF0 562 aaKnown RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 KIF18AQ8NI77 898 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 MRPS27Q92552 414 aaKnown RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 ERO1AQ96HE7 468 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 AGBL1Q96MI9 1066 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 GOLPH3LQ9H4A5 285 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 GPBP1L1Q9HC44 474 aaPredicted RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 RAVER2Q9HCJ3 691 aaKnown RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 IMPACTQ9P2X3 320 aa10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 COL11A1P12107 1806 aaPredicted RBP10.62□□□□□ -0.71
CNEP1R1-206ENST00000565556 OPLAHO14841 1288 aa10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 CFBP00751 764 aa10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 CETPP11597 493 aa10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 ALAS1P13196 640 aa10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 OSBPP22059 807 aa10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 GTF2A2P52657 109 aa10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 IRX3P78415 501 aaPredicted RBP10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 SNW1Q13573 536 aaKnown RBP10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 LETM2Q2VYF4 491 aa10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 TREML2Q5T2D2 321 aa10.61□□□□□ -0.71
CNEP1R1-206ENST00000565556 FSIP1Q8NA03 581 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms