RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 TXNP10599 105 aaKnown RBP23.12■■□□□ 1.29
CLN6-206ENST00000565471 GUCD1Q96NT3 240 aa23.12■■□□□ 1.29
CLN6-206ENST00000565471 RMDN3Q96TC7 470 aa23.12■■□□□ 1.29
CLN6-206ENST00000565471 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.12■■□□□ 1.29
CLN6-206ENST00000565471 MTG1Q9BT17 334 aaPredicted RBP23.12■■□□□ 1.29
CLN6-206ENST00000565471 MAP3K20Q9NYL2 800 aaKnown RBP23.12■■□□□ 1.29
CLN6-206ENST00000565471 RBM8AQ9Y5S9 174 aaKnown RBP23.12■■□□□ 1.29
CLN6-206ENST00000565471 B4GALT4O60513 344 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 CSF2RAP15509 400 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 HSD17B4P51659 736 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 TROAPQ12815 778 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 TRAF1Q13077 416 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 CCDC62Q6P9F0 684 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 MB21D2Q8IYB1 491 aaPredicted RBP23.11■■□□□ 1.29
CLN6-206ENST00000565471 SAMD3Q8N6K7 520 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 ALDH8A1Q9H2A2 487 aaPredicted RBP23.11■■□□□ 1.29
CLN6-206ENST00000565471 HIPK3Q9H422 1215 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 RIOX1Q9H6W3 641 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 SENP2Q9HC62 589 aa23.11■■□□□ 1.29
CLN6-206ENST00000565471 GPHNQ9NQX3 736 aaPredicted RBP23.11■■□□□ 1.29
CLN6-206ENST00000565471 OPLAHO14841 1288 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 PPP1R11O60927 126 aaPredicted RBP23.1■■□□□ 1.29
CLN6-206ENST00000565471 ARIH2O95376 493 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 MYL3P08590 195 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 CYP2C18P33260 490 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 STXBP2Q15833 593 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 PSRC1Q6PGN9 363 aaPredicted RBP23.1■■□□□ 1.29
CLN6-206ENST00000565471 C16orf59Q7L2K0 433 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 COPS5Q92905 334 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 TRPV6Q9H1D0 765 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 PCDHA1Q9Y5I3 950 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 SCN10AQ9Y5Y9 1956 aa23.1■■□□□ 1.29
CLN6-206ENST00000565471 TMEM265A0A087WTH1 108 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.09■■□□□ 1.29
CLN6-206ENST00000565471 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.09■■□□□ 1.29
CLN6-206ENST00000565471 CFBP00751 764 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 ANTXR2P58335 489 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 SLC35G1Q2M3R5 365 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 TMEM67Q5HYA8 995 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 TMEM240Q5SV17 173 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 ARHGEF16Q5VV41 709 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 CHST3Q7LGC8 479 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 IGDCC4Q8TDY8 1250 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 MTA3Q9BTC8 594 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 NOC4LQ9BVI4 516 aaKnown RBP23.09■■□□□ 1.29
CLN6-206ENST00000565471 PXMP2Q9NR77 195 aa23.09■■□□□ 1.29
CLN6-206ENST00000565471 KIAA1217Q5T5P2 1943 aa23.08■■□□□ 1.29
CLN6-206ENST00000565471 SUPT20HL2P0C7V6 817 aa23.08■■□□□ 1.29
CLN6-206ENST00000565471 RASIP1Q5U651 963 aa23.08■■□□□ 1.29
CLN6-206ENST00000565471 SEPT14Q6ZU15 432 aa23.08■■□□□ 1.29
CLN6-206ENST00000565471 CATIPQ7Z7H3 387 aa23.08■■□□□ 1.29
CLN6-206ENST00000565471 SLC17A8Q8NDX2 589 aa23.08■■□□□ 1.29
CLN6-206ENST00000565471 FAM161BQ96MY7 647 aa23.08■■□□□ 1.29
CLN6-206ENST00000565471 LSG1Q9H089 658 aaKnown RBP23.08■■□□□ 1.29
CLN6-206ENST00000565471 SEMA6BQ9H3T3 888 aa23.08■■□□□ 1.29
CLN6-206ENST00000565471 IL23AQ9NPF7 189 aa23.08■■□□□ 1.29
CLN6-206ENST00000565471 EIF3JO75822 258 aaKnown RBP23.07■■□□□ 1.28
CLN6-206ENST00000565471 GH1P01241 217 aa23.07■■□□□ 1.28
CLN6-206ENST00000565471 NR3C2P08235 984 aa23.07■■□□□ 1.28
CLN6-206ENST00000565471 EIF2AK2P19525 551 aaKnown RBP23.07■■□□□ 1.28
CLN6-206ENST00000565471 NFRKBQ6P4R8 1299 aa23.07■■□□□ 1.28
CLN6-206ENST00000565471 HOMER1Q86YM7 354 aa23.07■■□□□ 1.28
CLN6-206ENST00000565471 PIGSQ96S52 555 aa23.07■■□□□ 1.28
CLN6-206ENST00000565471 MAP3K14Q99558 947 aa23.07■■□□□ 1.28
CLN6-206ENST00000565471 ESYT1Q9BSJ8 1104 aa23.07■■□□□ 1.28
CLN6-206ENST00000565471 UMODL1Q5DID0 1318 aa23.07■■□□□ 1.28
CLN6-206ENST00000565471 CYTH3O43739 400 aa23.06■■□□□ 1.28
CLN6-206ENST00000565471 ACRP10323 421 aa23.06■■□□□ 1.28
CLN6-206ENST00000565471 PTPN11Q06124 597 aaPredicted RBP23.06■■□□□ 1.28
CLN6-206ENST00000565471 ZNF365Q70YC5 407 aa23.06■■□□□ 1.28
CLN6-206ENST00000565471 TTYH1Q9H313 450 aaPredicted RBP23.06■■□□□ 1.28
CLN6-206ENST00000565471 LAMA2P24043 3122 aaKnown RBP23.06■■□□□ 1.28
CLN6-206ENST00000565471 PNMA6FA0A0J9YX94 578 aa23.05■■□□□ 1.28
CLN6-206ENST00000565471 DDAH1O94760 285 aa23.05■■□□□ 1.28
CLN6-206ENST00000565471 ARHGAP1Q07960 439 aa23.05■■□□□ 1.28
CLN6-206ENST00000565471 LY6KQ17RY6 165 aa23.05■■□□□ 1.28
CLN6-206ENST00000565471 NBPF20Q3BBV1 942 aa23.05■■□□□ 1.28
CLN6-206ENST00000565471 BMP2KLQ5H9B9 411 aa23.05■■□□□ 1.28
CLN6-206ENST00000565471 CENPQQ7L2Z9 268 aaPredicted RBP23.05■■□□□ 1.28
CLN6-206ENST00000565471 PDCD2LQ9BRP1 358 aa23.05■■□□□ 1.28
CLN6-206ENST00000565471 WNT8AQ9H1J5 351 aa23.05■■□□□ 1.28
CLN6-206ENST00000565471 LY9Q9HBG7 655 aa23.05■■□□□ 1.28
CLN6-206ENST00000565471 TRMT13Q9NUP7 481 aaKnown RBP23.05■■□□□ 1.28
CLN6-206ENST00000565471 MMP3P08254 477 aa23.04■■□□□ 1.28
CLN6-206ENST00000565471 CASC1Q6TDU7 716 aa23.04■■□□□ 1.28
CLN6-206ENST00000565471 ZNF654Q8IZM8 581 aa23.04■■□□□ 1.28
CLN6-206ENST00000565471 AFG1LQ8WV93 481 aa23.04■■□□□ 1.28
CLN6-206ENST00000565471 HERVK_113Q902F9 699 aa23.04■■□□□ 1.28
CLN6-206ENST00000565471 EMID1Q96A84 441 aaPredicted RBP23.04■■□□□ 1.28
CLN6-206ENST00000565471 CDX2Q99626 313 aaPredicted RBP23.04■■□□□ 1.28
CLN6-206ENST00000565471 MTIF3Q9H2K0 278 aaKnown RBP23.04■■□□□ 1.28
CLN6-206ENST00000565471 DDX41Q9UJV9 622 aaKnown RBP23.04■■□□□ 1.28
CLN6-206ENST00000565471 COL6A3P12111 3177 aa23.04■■□□□ 1.28
CLN6-206ENST00000565471 GCOM1H8Y6P7 765 aaPredicted RBP23.03■■□□□ 1.28
CLN6-206ENST00000565471 PRC1O43663 620 aa23.03■■□□□ 1.28
CLN6-206ENST00000565471 POLR2MP0CAP2 368 aa23.03■■□□□ 1.28
CLN6-206ENST00000565471 DNAJB2P25686 324 aa23.03■■□□□ 1.28
CLN6-206ENST00000565471 HOXA13P31271 388 aaPredicted RBP23.03■■□□□ 1.28
CLN6-206ENST00000565471 MCM5P33992 734 aa23.03■■□□□ 1.28
CLN6-206ENST00000565471 CCL23P55773 120 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms