RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 DHX32Q7L7V1 743 aaKnown RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 PPP1R42Q7Z4L9 355 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 FBXO33Q7Z6M2 555 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 ERC1Q8IUD2 1116 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 BRSK2Q8IWQ3 736 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 ARL6IP6Q8N6S5 226 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 SH3TC2Q8TF17 1288 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 TBC1D22AQ8WUA7 517 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 RUFY2Q8WXA3 655 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 DNAAF4Q8WXU2 420 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 NELL1Q92832 810 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 ZNF496Q96IT1 587 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 MEGF10Q96KG7 1140 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 ZSCAN31Q96LW9 406 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 SERINC2Q96SA4 455 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 TRIM6Q9C030 488 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 IQCGQ9H095 443 aaKnown RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 TRPV5Q9NQA5 729 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 SPTLC3Q9NUV7 552 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 ZFATQ9P243 1243 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 DBF4Q9UBU7 674 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 XPO7Q9UIA9 1087 aaKnown RBP5.87□□□□□ -1.47
CAPN3-214ENST00000565274 PALD1Q9ULE6 856 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 ABCC6O95255 1503 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 FER1L4A9Z1Z3 1794 aa5.87□□□□□ -1.47
CAPN3-214ENST00000565274 ADAMTS7Q9UKP4 1686 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 SLIT3O75094 1523 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 HIP1O00291 1037 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 TNFRSF10BO14763 440 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 MMEP08473 750 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 RARAP10276 462 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 VCAM1P19320 739 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 SMARCA1P28370 1054 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 TRAPPC10P48553 1259 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 RBL2Q08999 1139 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 DGKZQ13574 1117 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 TOMM20Q15388 145 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 GRIK5Q16478 980 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 PKN1Q16512 942 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 PCSK7Q16549 785 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 INO80DQ53TQ3 878 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-214ENST00000565274 VPS53Q5VIR6 699 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 LMBRD2Q68DH5 695 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-214ENST00000565274 LARP1Q6PKG0 1096 aaKnown RBP5.86□□□□□ -1.47
CAPN3-214ENST00000565274 KSR2Q6VAB6 950 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 CNTROBQ8N137 903 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 ABTB2Q8N961 1025 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 SMG9Q9H0W8 520 aaKnown RBP5.86□□□□□ -1.47
CAPN3-214ENST00000565274 RPAP3Q9H6T3 665 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-214ENST00000565274 SH2B1Q9NRF2 756 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-214ENST00000565274 SLAIN2Q9P270 581 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-214ENST00000565274 TFIP11Q9UBB9 837 aaKnown RBP5.86□□□□□ -1.47
CAPN3-214ENST00000565274 BLOC1S6Q9UL45 172 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 LIMCH1Q9UPQ0 1083 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 ATP6V1DQ9Y5K8 247 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 SNX14Q9Y5W7 946 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 KAT6BQ8WYB5 2073 aa5.86□□□□□ -1.47
CAPN3-214ENST00000565274 KDM3BQ7LBC6 1761 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 LMO7Q8WWI1 1683 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 CAMTA1Q9Y6Y1 1673 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 ADCY9O60503 1353 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 JCADQ9P266 1359 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 FAM25EA8MYX2 175 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 RNMTO43148 476 aaKnown RBP5.85□□□□□ -1.47
CAPN3-214ENST00000565274 KINO60870 393 aaKnown RBP5.85□□□□□ -1.47
CAPN3-214ENST00000565274 DNAJC6O75061 913 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 SURF6O75683 361 aaKnown RBP5.85□□□□□ -1.47
CAPN3-214ENST00000565274 ALX3O95076 343 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 BPNT1O95861 308 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 HNRNPCP07910 306 aaKnown RBP eCLIP5.85□□□□□ -1.47
CAPN3-214ENST00000565274 EIF2AK2P19525 551 aaKnown RBP5.85□□□□□ -1.47
CAPN3-214ENST00000565274 ATP2B1P20020 1258 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 INPP5BP32019 993 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 DPYDQ12882 1025 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 EIF2B5Q13144 721 aaKnown RBP5.85□□□□□ -1.47
CAPN3-214ENST00000565274 TRIM29Q14134 588 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 NOLC1Q14978 699 aaKnown RBP eCLIP5.85□□□□□ -1.47
CAPN3-214ENST00000565274 NECTIN1Q15223 517 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 LDLRAD1Q5T700 205 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 KIAA1614Q5VZ46 1190 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 ILDR2Q71H61 639 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 USP48Q86UV5 1035 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 UNC5CLQ8IV45 518 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 MYOCDQ8IZQ8 938 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 DTWD1Q8N5C7 304 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 CCDC191Q8NCU4 936 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 RNF214Q8ND24 703 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 LINS1Q8NG48 757 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 ARMC5Q96C12 935 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 IFT43Q96FT9 208 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 PAWRQ96IZ0 340 aaKnown RBP5.85□□□□□ -1.47
CAPN3-214ENST00000565274 FAM167BQ9BTA0 163 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 DNAJC25Q9H1X3 360 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 PHAXQ9H814 394 aaKnown RBP5.85□□□□□ -1.47
CAPN3-214ENST00000565274 ANO2Q9NQ90 1003 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 ECHDC1Q9NTX5 307 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 PCMTD2Q9NV79 361 aa5.85□□□□□ -1.47
CAPN3-214ENST00000565274 HYPKQ9NX55 129 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms