RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CYP2C18P33260 490 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 HSD17B4P51659 736 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 PURAQ00577 322 aaKnown RBP11.67□□□□□ -0.54
CMTM3-209ENST00000565003 TMEM67Q5HYA8 995 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 FAM109BQ6ICB4 259 aaPredicted RBP11.67□□□□□ -0.54
CMTM3-209ENST00000565003 C16orf59Q7L2K0 433 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 HOMER1Q86YM7 354 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 IGDCC4Q8TDY8 1250 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 NSUN6Q8TEA1 469 aaKnown RBP11.67□□□□□ -0.54
CMTM3-209ENST00000565003 FAM161BQ96MY7 647 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 GUCD1Q96NT3 240 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 RMDN3Q96TC7 470 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 ESYT1Q9BSJ8 1104 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 TRPV6Q9H1D0 765 aa11.67□□□□□ -0.54
CMTM3-209ENST00000565003 GPHNQ9NQX3 736 aaPredicted RBP11.67□□□□□ -0.54
CMTM3-209ENST00000565003 BAZ2BQ9UIF8 2168 aaKnown RBP11.67□□□□□ -0.54
CMTM3-209ENST00000565003 UMODL1Q5DID0 1318 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 A6NJR5 290 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 B4DLN1 442 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 NKRFO15226 690 aaKnown RBP eCLIP11.66□□□□□ -0.542e-6■■■□□ 16.7
CMTM3-209ENST00000565003 MYL3P08590 195 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 TXNP10599 105 aaKnown RBP11.66□□□□□ -0.54
CMTM3-209ENST00000565003 EIF2AK2P19525 551 aaKnown RBP11.66□□□□□ -0.54
CMTM3-209ENST00000565003 CPT1AP50416 773 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 MRPL12P52815 198 aaKnown RBP11.66□□□□□ -0.54
CMTM3-209ENST00000565003 SMAD3P84022 425 aaKnown RBP11.66□□□□□ -0.54
CMTM3-209ENST00000565003 GHRHRQ02643 423 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 TTLL4Q14679 1199 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 SART3Q15020 963 aaKnown RBP11.66□□□□□ -0.54
CMTM3-209ENST00000565003 CCDC62Q6P9F0 684 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 SEPT14Q6ZU15 432 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 CENPQQ7L2Z9 268 aaPredicted RBP11.66□□□□□ -0.54
CMTM3-209ENST00000565003 PPP1R13LQ8WUF5 828 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 PIGSQ96S52 555 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.66□□□□□ -0.542e-6■■□□□ 14.2
CMTM3-209ENST00000565003 MYL10Q9BUA6 226 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 ALDH8A1Q9H2A2 487 aaPredicted RBP11.66□□□□□ -0.54
CMTM3-209ENST00000565003 HIPK3Q9H422 1215 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 RIOX1Q9H6W3 641 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 LY9Q9HBG7 655 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 PXMP2Q9NR77 195 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 POLR3EQ9NVU0 708 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 STXBP5LQ9Y2K9 1186 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 PCDHA1Q9Y5I3 950 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 SCN10AQ9Y5Y9 1956 aa11.66□□□□□ -0.54
CMTM3-209ENST00000565003 SLC27A2O14975 620 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 ACRP10323 421 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 HOXA13P31271 388 aaPredicted RBP11.65□□□□□ -0.54
CMTM3-209ENST00000565003 PPIGQ13427 754 aaKnown RBP eCLIP11.65□□□□□ -0.54
CMTM3-209ENST00000565003 STXBP2Q15833 593 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 LY6KQ17RY6 165 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 BMP2KLQ5H9B9 411 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 TMEM240Q5SV17 173 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 ARHGEF16Q5VV41 709 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 CATIPQ7Z7H3 387 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 TMEM199Q8N511 208 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 IWS1Q96ST2 819 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 MTG1Q9BT17 334 aaPredicted RBP11.65□□□□□ -0.54
CMTM3-209ENST00000565003 NOC4LQ9BVI4 516 aaKnown RBP11.65□□□□□ -0.54
CMTM3-209ENST00000565003 SEZ6LQ9BYH1 1024 aa11.65□□□□□ -0.54
CMTM3-209ENST00000565003 TRMT13Q9NUP7 481 aaKnown RBP11.65□□□□□ -0.54
CMTM3-209ENST00000565003 LAMA2P24043 3122 aaKnown RBP11.64□□□□□ -0.55
CMTM3-209ENST00000565003 KIAA1217Q5T5P2 1943 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 COL6A3P12111 3177 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 PRC1O43663 620 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 NR3C2P08235 984 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 ARHGAP1Q07960 439 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 NECTIN1Q15223 517 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 ZNF365Q70YC5 407 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 ZNF654Q8IZM8 581 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 IL31RAQ8NI17 732 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 AFG1LQ8WV93 481 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 PIBF1Q8WXW3 757 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 PDCD2LQ9BRP1 358 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 WNT8AQ9H1J5 351 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 TTYH1Q9H313 450 aaPredicted RBP11.64□□□□□ -0.55
CMTM3-209ENST00000565003 ANO2Q9NQ90 1003 aa11.64□□□□□ -0.55
CMTM3-209ENST00000565003 PNMA6FA0A0J9YX94 578 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 SH2B2O14492 632 aaPredicted RBP11.63□□□□□ -0.55
CMTM3-209ENST00000565003 EIF3JO75822 258 aaKnown RBP11.63□□□□□ -0.55
CMTM3-209ENST00000565003 RGS20O76081 388 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 DDAH1O94760 285 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 GH1P01241 217 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 MMP3P08254 477 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 CYP2C9P11712 490 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 MCM5P33992 734 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 CCL23P55773 120 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 NBPF20Q3BBV1 942 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
CMTM3-209ENST00000565003 RASIP1Q5U651 963 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 PSRC1Q6PGN9 363 aaPredicted RBP11.63□□□□□ -0.55
CMTM3-209ENST00000565003 CASC1Q6TDU7 716 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 MTA3Q9BTC8 594 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 IL23AQ9NPF7 189 aa11.63□□□□□ -0.55
CMTM3-209ENST00000565003 MAP3K20Q9NYL2 800 aaKnown RBP11.63□□□□□ -0.55
CMTM3-209ENST00000565003 DDX41Q9UJV9 622 aaKnown RBP11.63□□□□□ -0.55
CMTM3-209ENST00000565003 CDH23Q9H251 3354 aa11.62□□□□□ -0.55
CMTM3-209ENST00000565003 GCOM1H8Y6P7 765 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms