RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KRT83P78385 493 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 GUCY2DQ02846 1103 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 TBC1D8BQ0IIM8 1120 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 ALS2CLQ60I27 953 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 C6orf89Q6UWU4 347 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 OSBPL9Q96SU4 736 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 TRIM6Q9C030 488 aaPredicted RBP18.05■□□□□ 0.48
LINC00554-201ENST00000564841 SALL4Q9UJQ4 1053 aa18.05■□□□□ 0.48
LINC00554-201ENST00000564841 RTN2O75298 545 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 KIF5AQ12840 1032 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 CCDC181Q5TID7 509 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 C8orf74Q6P047 294 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 MYH13Q9UKX3 1938 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 MAATS1Q7Z4T9 603 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 ADGRA1Q86SQ6 560 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 THOC1Q96FV9 657 aaKnown RBP18.04■□□□□ 0.48
LINC00554-201ENST00000564841 PLIN2Q99541 437 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 ANKIB1Q9P2G1 1089 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 RWDD2AQ9UIY3 292 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 TCRBV5S4A2TA0A5A2 114 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 TRIM75PA6NK02 468 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 GSG1L2A8MUP6 293 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 RTN1Q16799 776 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 CAVIN4Q5BKX8 364 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 AATFQ9NY61 560 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC00554-201ENST00000564841 CAPN11Q9UMQ6 739 aa18.04■□□□□ 0.48
LINC00554-201ENST00000564841 ANKRD36CQ5JPF3 1778 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 BUB1O43683 1085 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 GBP2P32456 591 aaPredicted RBP18.03■□□□□ 0.48
LINC00554-201ENST00000564841 UBE3CQ15386 1083 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 EMBQ6PCB8 327 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 TXNRD3Q86VQ6 643 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 FOXP1Q9H334 677 aaPredicted RBP18.03■□□□□ 0.48
LINC00554-201ENST00000564841 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.03■□□□□ 0.48
LINC00554-201ENST00000564841 SPATA31A6Q5VVP1 1343 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 EIF4E1BA6NMX2 242 aaKnown RBP18.03■□□□□ 0.48
LINC00554-201ENST00000564841 IPO7O95373 1038 aaKnown RBP18.03■□□□□ 0.48
LINC00554-201ENST00000564841 FAM107AO95990 144 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 IFNAR1P17181 557 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 DYNLL1P63167 89 aaKnown RBP18.03■□□□□ 0.48
LINC00554-201ENST00000564841 TRIM14Q14142 442 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 WTAPQ15007 396 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 TYW1BQ6NUM6 668 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 TMC4Q7Z404 712 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 TICAM2Q86XR7 235 aa18.03■□□□□ 0.48
LINC00554-201ENST00000564841 BCCIPQ9P287 314 aaKnown RBP eCLIP18.03■□□□□ 0.48
LINC00554-201ENST00000564841 SPEF2Q9C093 1822 aa18.02■□□□□ 0.48
LINC00554-201ENST00000564841 MRPL12P52815 198 aaKnown RBP18.02■□□□□ 0.48
LINC00554-201ENST00000564841 YTHDF3Q7Z739 585 aaKnown RBP18.02■□□□□ 0.48
LINC00554-201ENST00000564841 CNTNAP4Q9C0A0 1308 aa18.02■□□□□ 0.48
LINC00554-201ENST00000564841 NFIXQ14938 502 aa18.02■□□□□ 0.48
LINC00554-201ENST00000564841 TLDC1Q6P9B6 456 aa18.02■□□□□ 0.48
LINC00554-201ENST00000564841 ZNF507Q8TCN5 953 aa18.02■□□□□ 0.48
LINC00554-201ENST00000564841 BAIAP2L1Q9UHR4 511 aa18.02■□□□□ 0.48
LINC00554-201ENST00000564841 TRPC5Q9UL62 973 aaPredicted RBP18.02■□□□□ 0.48
LINC00554-201ENST00000564841 ATXN2Q99700 1313 aaKnown RBP18.02■□□□□ 0.47
LINC00554-201ENST00000564841 HEXIM1O94992 359 aaKnown RBP18.01■□□□□ 0.47
LINC00554-201ENST00000564841 UPP2O95045 317 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 CYLC1P35663 651 aaPredicted RBP18.01■□□□□ 0.47
LINC00554-201ENST00000564841 AKNAD1Q5T1N1 836 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 IQCEQ6IPM2 695 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 TRIM22Q8IYM9 498 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 AKAP11Q9UKA4 1901 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 LGALS16A8MUM7 142 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 ADAMTS3O15072 1205 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 NMT2O60551 498 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 EZRP15311 586 aaKnown RBP18.01■□□□□ 0.47
LINC00554-201ENST00000564841 VEGFAP15692 232 aaPredicted RBP18.01■□□□□ 0.47
LINC00554-201ENST00000564841 VAV2P52735 878 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 ITGB3BPQ13352 177 aaPredicted RBP18.01■□□□□ 0.47
LINC00554-201ENST00000564841 EHBP1Q8NDI1 1231 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 STAMBPL1Q96FJ0 436 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 UBAC1Q9BSL1 405 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 LEMD3Q9Y2U8 911 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 L3MBTL1Q9Y468 752 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 ANO9A1A5B4 782 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 PTGDRQ13258 359 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 CRYMQ14894 314 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 ANKRD20A8PQ5CZ79 823 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 CRACR2BQ8N4Y2 399 aaPredicted RBP18.01■□□□□ 0.47
LINC00554-201ENST00000564841 FAM84BQ96KN1 310 aaPredicted RBP18.01■□□□□ 0.47
LINC00554-201ENST00000564841 ATP6V1G3Q96LB4 118 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 KIF9Q9HAQ2 790 aa18.01■□□□□ 0.47
LINC00554-201ENST00000564841 BSDC1Q9NW68 430 aaPredicted RBP18.01■□□□□ 0.47
LINC00554-201ENST00000564841 PHF20L1A8MW92 1017 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 PLEKHA8P1O95397 391 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 SCTRP47872 440 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 SF3B3Q15393 1217 aaKnown RBP18■□□□□ 0.47
LINC00554-201ENST00000564841 SPATS2Q86XZ4 545 aaKnown RBP18■□□□□ 0.47
LINC00554-201ENST00000564841 CAVIN3Q969G5 261 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 PURBQ96QR8 312 aaKnown RBP18■□□□□ 0.47
LINC00554-201ENST00000564841 LRRC4CQ9HCJ2 640 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 PACSIN2Q9UNF0 486 aaPredicted RBP18■□□□□ 0.47
LINC00554-201ENST00000564841 PLAAQ9Y263 795 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 V9GY48 417 aaPredicted RBP18■□□□□ 0.47
LINC00554-201ENST00000564841 DCDC2CA8MYV0 355 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 SPAG1Q07617 926 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 SGMS1Q86VZ5 419 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 CCDC42Q96M95 316 aa18■□□□□ 0.47
LINC00554-201ENST00000564841 NYXQ9GZU5 481 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms