RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CLEC1BQ9P126 229 aa7.1□□□□□ -1.27
CHD9-212ENST00000564641 PPP1R11O60927 126 aaPredicted RBP7.09□□□□□ -1.27
CHD9-212ENST00000564641 SLURP1P55000 103 aa7.09□□□□□ -1.27
CHD9-212ENST00000564641 CACNB2Q08289 660 aaPredicted RBP7.09□□□□□ -1.27
CHD9-212ENST00000564641 VWA3BQ502W6 1294 aa7.09□□□□□ -1.27
CHD9-212ENST00000564641 E4F1Q66K89 784 aaPredicted RBP7.09□□□□□ -1.27
CHD9-212ENST00000564641 GTF2IRD2BQ6EKJ0 949 aa7.09□□□□□ -1.27
CHD9-212ENST00000564641 GTF2IRD2Q86UP8 949 aa7.09□□□□□ -1.27
CHD9-212ENST00000564641 PPP1R14AQ96A00 147 aa7.09□□□□□ -1.27
CHD9-212ENST00000564641 MRGPRX3Q96LB0 322 aa7.09□□□□□ -1.27
CHD9-212ENST00000564641 CCDC140Q96MF4 163 aa7.09□□□□□ -1.27
CHD9-212ENST00000564641 ACTR10Q9NZ32 417 aa7.09□□□□□ -1.27
CHD9-212ENST00000564641 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
CHD9-212ENST00000564641 FUCA1P04066 466 aa7.08□□□□□ -1.28
CHD9-212ENST00000564641 ERCC5P28715 1186 aaPredicted RBP7.08□□□□□ -1.28
CHD9-212ENST00000564641 HOXC12P31275 282 aa7.08□□□□□ -1.28
CHD9-212ENST00000564641 BUD31P41223 144 aaPredicted RBP7.08□□□□□ -1.28
CHD9-212ENST00000564641 GTF2A2P52657 109 aa7.08□□□□□ -1.28
CHD9-212ENST00000564641 LIPIQ6XZB0 460 aa7.08□□□□□ -1.28
CHD9-212ENST00000564641 GPRC5CQ9NQ84 441 aa7.08□□□□□ -1.28
CHD9-212ENST00000564641 FBLN5Q9UBX5 448 aa7.08□□□□□ -1.28
CHD9-212ENST00000564641 CPP00450 1065 aa7.07□□□□□ -1.28
CHD9-212ENST00000564641 NTRK1P04629 796 aa7.07□□□□□ -1.28
CHD9-212ENST00000564641 THBDP07204 575 aa7.07□□□□□ -1.28
CHD9-212ENST00000564641 FXNQ16595 210 aa7.07□□□□□ -1.28
CHD9-212ENST00000564641 FAM178BQ8IXR5 827 aa7.07□□□□□ -1.28
CHD9-212ENST00000564641 ZDHHC14Q8IZN3 488 aa7.07□□□□□ -1.28
CHD9-212ENST00000564641 SYT8Q8NBV8 401 aa7.07□□□□□ -1.28
CHD9-212ENST00000564641 PLEKHO2Q8TD55 490 aa7.07□□□□□ -1.28
CHD9-212ENST00000564641 PRKAG3Q9UGI9 489 aa7.07□□□□□ -1.28
CHD9-212ENST00000564641 SMAD7O15105 426 aaKnown RBP7.06□□□□□ -1.28
CHD9-212ENST00000564641 MYO1BO43795 1136 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 CELA3BP08861 270 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 MC3RP41968 323 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 SLC6A11P48066 632 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 MROH9Q5TGP6 573 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 C6orf15Q6UXA7 325 aaPredicted RBP7.06□□□□□ -1.28
CHD9-212ENST00000564641 RIOX2Q8IUF8 465 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 SMARCC2Q8TAQ2 1214 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 SEC14L1Q92503 715 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 EPN3Q9H201 632 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 RXFP1Q9HBX9 757 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 USP40Q9NVE5 1235 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 MARCH2Q9P0N8 246 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 NTMQ9P121 344 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 LRP2BPQ9P2M1 347 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 PLA2G2DQ9UNK4 145 aa7.06□□□□□ -1.28
CHD9-212ENST00000564641 TIMM13Q9Y5L4 95 aaPredicted RBP7.06□□□□□ -1.28
CHD9-212ENST00000564641 SCG5P05408 212 aa7.05□□□□□ -1.28
CHD9-212ENST00000564641 CYP2C8P10632 490 aa7.05□□□□□ -1.28
CHD9-212ENST00000564641 RPL11P62913 178 aaKnown RBP7.05□□□□□ -1.28
CHD9-212ENST00000564641 KCNAB2Q13303 367 aa7.05□□□□□ -1.28
CHD9-212ENST00000564641 SV2CQ496J9 727 aa7.05□□□□□ -1.28
CHD9-212ENST00000564641 LARP1BQ659C4 914 aaKnown RBP7.05□□□□□ -1.28
CHD9-212ENST00000564641 ETV3LQ6ZN32 361 aa7.05□□□□□ -1.28
CHD9-212ENST00000564641 TTLL7Q6ZT98 887 aa7.05□□□□□ -1.28
CHD9-212ENST00000564641 NPLOC4Q8TAT6 608 aa7.05□□□□□ -1.28
CHD9-212ENST00000564641 FRS2Q8WU20 508 aa7.05□□□□□ -1.28
CHD9-212ENST00000564641 NGRNQ9NPE2 291 aaKnown RBP7.05□□□□□ -1.28
CHD9-212ENST00000564641 CNOT11Q9UKZ1 510 aaKnown RBP7.05□□□□□ -1.28
CHD9-212ENST00000564641 C22orf46C9J442 243 aa7.04□□□□□ -1.28
CHD9-212ENST00000564641 TCF3P15923 654 aa7.04□□□□□ -1.28
CHD9-212ENST00000564641 TESK1Q15569 626 aa7.04□□□□□ -1.28
CHD9-212ENST00000564641 ACBD5Q5T8D3 534 aaPredicted RBP7.04□□□□□ -1.28
CHD9-212ENST00000564641 MBLAC2Q68D91 279 aa7.04□□□□□ -1.28
CHD9-212ENST00000564641 ZC3H18Q86VM9 953 aaKnown RBP7.04□□□□□ -1.28
CHD9-212ENST00000564641 CARFQ8N187 725 aa7.04□□□□□ -1.28
CHD9-212ENST00000564641 LINC00482Q8N8I6 264 aa7.04□□□□□ -1.28
CHD9-212ENST00000564641 ZNF526Q8TF50 670 aaPredicted RBP7.04□□□□□ -1.28
CHD9-212ENST00000564641 DPF3Q92784 378 aa7.04□□□□□ -1.28
CHD9-212ENST00000564641 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.04□□□□□ -1.28
CHD9-212ENST00000564641 CCDC9Q9Y3X0 531 aaKnown RBP7.04□□□□□ -1.28
CHD9-212ENST00000564641 MRVI1Q9Y6F6 885 aa7.04□□□□□ -1.28
CHD9-212ENST00000564641 AGRPO00253 132 aa7.03□□□□□ -1.28
CHD9-212ENST00000564641 SMARCA5O60264 1052 aaPredicted RBP7.03□□□□□ -1.28
CHD9-212ENST00000564641 SUSD5O60279 629 aa7.03□□□□□ -1.28
CHD9-212ENST00000564641 DDAH1O94760 285 aa7.03□□□□□ -1.28
CHD9-212ENST00000564641 ITGAVP06756 1048 aa7.03□□□□□ -1.28
CHD9-212ENST00000564641 DLX2Q07687 328 aaPredicted RBP7.03□□□□□ -1.28
CHD9-212ENST00000564641 EEPD1Q7L9B9 569 aa7.03□□□□□ -1.28
CHD9-212ENST00000564641 MIB1Q86YT6 1006 aa7.03□□□□□ -1.28
CHD9-212ENST00000564641 Q8N1Y9 231 aa7.03□□□□□ -1.28
CHD9-212ENST00000564641 DIO2Q92813 273 aa7.03□□□□□ -1.28
CHD9-212ENST00000564641 BCAS3Q9H6U6 928 aa7.03□□□□□ -1.28
CHD9-212ENST00000564641 ADAMTS20P59510 1910 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 MEFVO15553 781 aaPredicted RBP7.02□□□□□ -1.29
CHD9-212ENST00000564641 SNRPB2P08579 225 aaKnown RBP7.02□□□□□ -1.29
CHD9-212ENST00000564641 SARSP49591 514 aaKnown RBP7.02□□□□□ -1.29
CHD9-212ENST00000564641 GJA9P57773 515 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 CHRNA2Q15822 529 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 INF2Q27J81 1249 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 NT5DC1Q5TFE4 455 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 ZNF227Q86WZ6 799 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 BTN2A2Q8WVV5 523 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 ZBTB8AQ96BR9 441 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 DDX11Q96FC9 970 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 BORCS6Q96GS4 357 aa7.02□□□□□ -1.29
CHD9-212ENST00000564641 ADAM7Q9H2U9 754 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms