RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 BTG4Q9NY30 223 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 PCDHA5Q9Y5H7 936 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 FUCA1P04066 466 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 CAPNS1P04632 268 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 SCG5P05408 212 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 PI3P19957 117 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 ATP2B1P20020 1258 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 GFRA1P56159 465 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 DENND5AQ6IQ26 1287 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 CKAP2LQ8IYA6 745 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 TMEM145Q8NBT3 493 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 USP33Q8TEY7 942 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 SIGLEC10Q96LC7 697 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 MARCH2Q9P0N8 246 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 PPP1R1BQ9UD71 204 aaPredicted RBP7.64□□□□□ -1.19
UBR1-205ENST00000564540 DBR1Q9UK59 544 aaKnown RBP7.64□□□□□ -1.19
UBR1-205ENST00000564540 KCTD3Q9Y597 815 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 IRAK3Q9Y616 596 aa7.64□□□□□ -1.19
UBR1-205ENST00000564540 AGRPO00253 132 aa7.63□□□□□ -1.19
UBR1-205ENST00000564540 CIAPIN1Q6FI81 312 aa7.63□□□□□ -1.19
UBR1-205ENST00000564540 CABP7Q86V35 215 aa7.63□□□□□ -1.19
UBR1-205ENST00000564540 TEX2Q8IWB9 1127 aa7.63□□□□□ -1.19
UBR1-205ENST00000564540 ZSCAN18Q8TBC5 510 aaPredicted RBP7.63□□□□□ -1.19
UBR1-205ENST00000564540 PLEKHO2Q8TD55 490 aa7.63□□□□□ -1.19
UBR1-205ENST00000564540 BCAS3Q9H6U6 928 aa7.63□□□□□ -1.19
UBR1-205ENST00000564540 EPB41L4AQ9HCS5 686 aaPredicted RBP7.63□□□□□ -1.19
UBR1-205ENST00000564540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.63□□□□□ -1.19
UBR1-205ENST00000564540 IRS4O14654 1257 aaPredicted RBP7.62□□□□□ -1.19
UBR1-205ENST00000564540 MEFVO15553 781 aaPredicted RBP7.62□□□□□ -1.19
UBR1-205ENST00000564540 NTRK1P04629 796 aa7.62□□□□□ -1.19
UBR1-205ENST00000564540 ZSCAN22P10073 491 aaPredicted RBP7.62□□□□□ -1.19
UBR1-205ENST00000564540 GTF2F1P35269 517 aaKnown RBP eCLIP7.62□□□□□ -1.19
UBR1-205ENST00000564540 WWC2Q6AWC2 1192 aa7.62□□□□□ -1.19
UBR1-205ENST00000564540 TTLL10Q6ZVT0 673 aa7.62□□□□□ -1.19
UBR1-205ENST00000564540 PPIL6Q8IXY8 311 aa7.62□□□□□ -1.19
UBR1-205ENST00000564540 DIO2Q92813 273 aa7.62□□□□□ -1.19
UBR1-205ENST00000564540 C1orf159Q96HA4 380 aa7.62□□□□□ -1.19
UBR1-205ENST00000564540 CCDC140Q96MF4 163 aa7.62□□□□□ -1.19
UBR1-205ENST00000564540 IER2Q9BTL4 223 aa7.62□□□□□ -1.19
UBR1-205ENST00000564540 SIT1Q9Y3P8 196 aa7.62□□□□□ -1.19
UBR1-205ENST00000564540 IRS2Q9Y4H2 1338 aa7.61□□□□□ -1.19
UBR1-205ENST00000564540 CPP00450 1065 aa7.61□□□□□ -1.19
UBR1-205ENST00000564540 LCP1P13796 627 aa7.61□□□□□ -1.19
UBR1-205ENST00000564540 FBLN1P23142 703 aa7.61□□□□□ -1.19
UBR1-205ENST00000564540 FPR2P25090 351 aa7.61□□□□□ -1.19
UBR1-205ENST00000564540 BUD31P41223 144 aaPredicted RBP7.61□□□□□ -1.19
UBR1-205ENST00000564540 E4F1Q66K89 784 aaPredicted RBP7.61□□□□□ -1.19
UBR1-205ENST00000564540 IQCEQ6IPM2 695 aa7.61□□□□□ -1.19
UBR1-205ENST00000564540 TMEFF1Q8IYR6 380 aa7.61□□□□□ -1.19
UBR1-205ENST00000564540 FBXL7Q9UJT9 491 aa7.61□□□□□ -1.19
UBR1-205ENST00000564540 CCDC85CA6NKD9 419 aa7.6□□□□□ -1.19
UBR1-205ENST00000564540 C22orf46C9J442 243 aa7.6□□□□□ -1.19
UBR1-205ENST00000564540 BUB1BO60566 1050 aaPredicted RBP7.6□□□□□ -1.19
UBR1-205ENST00000564540 ZNF385BQ569K4 471 aa7.6□□□□□ -1.19
UBR1-205ENST00000564540 SLC35F1Q5T1Q4 408 aa7.6□□□□□ -1.19
UBR1-205ENST00000564540 NETO2Q8NC67 525 aa7.6□□□□□ -1.19
UBR1-205ENST00000564540 RCBTB1Q8NDN9 531 aa7.6□□□□□ -1.19
UBR1-205ENST00000564540 ST13P5Q8NFI4 369 aaPredicted RBP7.6□□□□□ -1.19
UBR1-205ENST00000564540 TIMM13Q9Y5L4 95 aaPredicted RBP7.6□□□□□ -1.19
UBR1-205ENST00000564540 RFXAPO00287 272 aa7.59□□□□□ -1.19
UBR1-205ENST00000564540 U2SURPO15042 1029 aaKnown RBP7.59□□□□□ -1.19
UBR1-205ENST00000564540 DLX3O60479 287 aa7.59□□□□□ -1.19
UBR1-205ENST00000564540 BCL6P41182 706 aa7.59□□□□□ -1.19
UBR1-205ENST00000564540 RPL11P62913 178 aaKnown RBP7.59□□□□□ -1.19
UBR1-205ENST00000564540 KCNAB2Q13303 367 aa7.59□□□□□ -1.19
UBR1-205ENST00000564540 ACBD5Q5T8D3 534 aaPredicted RBP7.59□□□□□ -1.19
UBR1-205ENST00000564540 NLRP10Q86W26 655 aa7.59□□□□□ -1.19
UBR1-205ENST00000564540 ARHGEF4Q9NR80 690 aa7.59□□□□□ -1.19
UBR1-205ENST00000564540 MSRB2Q9Y3D2 182 aa7.59□□□□□ -1.19
UBR1-205ENST00000564540 PCDHA2Q9Y5H9 948 aa7.59□□□□□ -1.19
UBR1-205ENST00000564540 ASGR2P07307 311 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 ATF2P15336 505 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 IGFBP6P24592 240 aaPredicted RBP7.58□□□□□ -1.2
UBR1-205ENST00000564540 LTBRP36941 435 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 MC3RP41968 323 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 LIMS1P48059 325 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 HSP90AA2PQ14568 343 aaPredicted RBP7.58□□□□□ -1.2
UBR1-205ENST00000564540 YOD1Q5VVQ6 348 aaPredicted RBP7.58□□□□□ -1.2
UBR1-205ENST00000564540 SPATC1Q76KD6 591 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 CEP68Q76N32 757 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 FAM129CQ86XR2 697 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 KCTD13Q8WZ19 329 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 ALG3Q92685 438 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 TSPAN17Q96FV3 270 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 PEX11GQ96HA9 241 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 SGSM3Q96HU1 749 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 NUDT5Q9UKK9 219 aa7.58□□□□□ -1.2
UBR1-205ENST00000564540 IQCA1LA6NCM1 817 aa7.57□□□□□ -1.2
UBR1-205ENST00000564540 PRODHO43272 600 aa7.57□□□□□ -1.2
UBR1-205ENST00000564540 PMLP29590 882 aa7.57□□□□□ -1.2
UBR1-205ENST00000564540 MAP4K2Q12851 820 aa7.57□□□□□ -1.2
UBR1-205ENST00000564540 TESK1Q15569 626 aa7.57□□□□□ -1.2
UBR1-205ENST00000564540 CNKSR3Q6P9H4 555 aa7.57□□□□□ -1.2
UBR1-205ENST00000564540 AMIGO3Q86WK7 504 aa7.57□□□□□ -1.2
UBR1-205ENST00000564540 DACT3Q96B18 629 aaPredicted RBP7.57□□□□□ -1.2
UBR1-205ENST00000564540 AARSD1Q9BTE6 412 aaKnown RBP7.57□□□□□ -1.2
UBR1-205ENST00000564540 PDPK1O15530 556 aa7.56□□□□□ -1.2
UBR1-205ENST00000564540 MYO1BO43795 1136 aa7.56□□□□□ -1.2
UBR1-205ENST00000564540 PFKLP17858 780 aa7.56□□□□□ -1.2
UBR1-205ENST00000564540 TARBP2Q15633 366 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms