RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 SCFD2Q8WU76 684 aa29.35■■■□□ 2.29
AC009041.3-201ENST00000564390 COPS5Q92905 334 aa29.35■■■□□ 2.29
AC009041.3-201ENST00000564390 MROH7Q68CQ1 1323 aa29.35■■■□□ 2.29
AC009041.3-201ENST00000564390 ZEB2O60315 1214 aa29.34■■■□□ 2.29
AC009041.3-201ENST00000564390 DDAH1O94760 285 aa29.34■■■□□ 2.29
AC009041.3-201ENST00000564390 ARIH2O95376 493 aa29.34■■■□□ 2.29
AC009041.3-201ENST00000564390 HSD17B4P51659 736 aa29.34■■■□□ 2.29
AC009041.3-201ENST00000564390 PSMC6P62333 389 aa29.34■■■□□ 2.29
AC009041.3-201ENST00000564390 LRIT3Q3SXY7 679 aa29.34■■■□□ 2.29
AC009041.3-201ENST00000564390 RAB11FIP4Q86YS3 637 aa29.34■■■□□ 2.29
AC009041.3-201ENST00000564390 MAF1Q9H063 256 aa29.34■■■□□ 2.29
AC009041.3-201ENST00000564390 BAZ2BQ9UIF8 2168 aaKnown RBP29.33■■■□□ 2.29
AC009041.3-201ENST00000564390 RXRAP19793 462 aa29.33■■■□□ 2.29
AC009041.3-201ENST00000564390 HOXA13P31271 388 aaPredicted RBP29.33■■■□□ 2.29
AC009041.3-201ENST00000564390 C9orf50Q5SZB4 431 aa29.33■■■□□ 2.29
AC009041.3-201ENST00000564390 ARHGEF16Q5VV41 709 aa29.33■■■□□ 2.29
AC009041.3-201ENST00000564390 FAM126BQ8IXS8 530 aa29.33■■■□□ 2.29
AC009041.3-201ENST00000564390 CTCFLQ8NI51 663 aaPredicted RBP29.33■■■□□ 2.29
AC009041.3-201ENST00000564390 TMEM87BQ96K49 555 aa29.33■■■□□ 2.29
AC009041.3-201ENST00000564390 TBX21Q9UL17 535 aa29.33■■■□□ 2.29
AC009041.3-201ENST00000564390 GRIN2DO15399 1336 aa29.32■■■□□ 2.28
AC009041.3-201ENST00000564390 CCDC69A6NI79 296 aa29.32■■■□□ 2.28
AC009041.3-201ENST00000564390 CABYRO75952 493 aa29.32■■■□□ 2.28
AC009041.3-201ENST00000564390 TXNP10599 105 aaKnown RBP29.32■■■□□ 2.28
AC009041.3-201ENST00000564390 MTA3Q9BTC8 594 aa29.32■■■□□ 2.28
AC009041.3-201ENST00000564390 PXMP2Q9NR77 195 aa29.32■■■□□ 2.28
AC009041.3-201ENST00000564390 PNMA6FA0A0J9YX94 578 aa29.31■■■□□ 2.28
AC009041.3-201ENST00000564390 NEFLP07196 543 aa29.31■■■□□ 2.28
AC009041.3-201ENST00000564390 ITGA7Q13683 1181 aa29.31■■■□□ 2.28
AC009041.3-201ENST00000564390 SHHQ15465 462 aa29.31■■■□□ 2.28
AC009041.3-201ENST00000564390 RNF20Q5VTR2 975 aa29.31■■■□□ 2.28
AC009041.3-201ENST00000564390 SEPT14Q6ZU15 432 aa29.31■■■□□ 2.28
AC009041.3-201ENST00000564390 KIAA1217Q5T5P2 1943 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 PLEKHA8P1O95397 391 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 MYL3P08590 195 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 KIF5BP33176 963 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 CPT1AP50416 773 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 EPHB4P54760 987 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 GHRHRQ02643 423 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 TTLL4Q14679 1199 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 IWS1Q96ST2 819 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 MAP3K14Q99558 947 aa29.3■■■□□ 2.28
AC009041.3-201ENST00000564390 NKRFO15226 690 aaKnown RBP eCLIP29.29■■■□□ 2.28
AC009041.3-201ENST00000564390 STXBP2Q15833 593 aa29.29■■■□□ 2.28
AC009041.3-201ENST00000564390 RASEFQ8IZ41 740 aa29.29■■■□□ 2.28
AC009041.3-201ENST00000564390 SLC43A3Q8NBI5 491 aa29.29■■■□□ 2.28
AC009041.3-201ENST00000564390 TCEANC2Q96MN5 208 aa29.29■■■□□ 2.28
AC009041.3-201ENST00000564390 SPZ1Q9BXG8 430 aa29.29■■■□□ 2.28
AC009041.3-201ENST00000564390 TLR3O15455 904 aaKnown RBP29.28■■■□□ 2.28
AC009041.3-201ENST00000564390 NR3C2P08235 984 aa29.28■■■□□ 2.28
AC009041.3-201ENST00000564390 LIFRP42702 1097 aa29.28■■■□□ 2.28
AC009041.3-201ENST00000564390 PURAQ00577 322 aaKnown RBP29.28■■■□□ 2.28
AC009041.3-201ENST00000564390 LY6KQ17RY6 165 aa29.28■■■□□ 2.28
AC009041.3-201ENST00000564390 CMTR1Q8N1G2 835 aaKnown RBP29.28■■■□□ 2.28
AC009041.3-201ENST00000564390 IL31RAQ8NI17 732 aa29.28■■■□□ 2.28
AC009041.3-201ENST00000564390 PPP1R12CQ9BZL4 782 aa29.28■■■□□ 2.28
AC009041.3-201ENST00000564390 POLR3EQ9NVU0 708 aa29.28■■■□□ 2.28
AC009041.3-201ENST00000564390 CD4P01730 458 aa29.27■■■□□ 2.28
AC009041.3-201ENST00000564390 FPGSQ05932 587 aa29.27■■■□□ 2.28
AC009041.3-201ENST00000564390 TRAF1Q13077 416 aa29.27■■■□□ 2.28
AC009041.3-201ENST00000564390 ADCK5Q3MIX3 580 aa29.27■■■□□ 2.28
AC009041.3-201ENST00000564390 CCDC62Q6P9F0 684 aa29.27■■■□□ 2.28
AC009041.3-201ENST00000564390 TMTC2Q8N394 836 aa29.27■■■□□ 2.28
AC009041.3-201ENST00000564390 PPP1R13LQ8WUF5 828 aa29.27■■■□□ 2.28
AC009041.3-201ENST00000564390 NEK1Q96PY6 1258 aa29.27■■■□□ 2.28
AC009041.3-201ENST00000564390 PDCD2LQ9BRP1 358 aa29.27■■■□□ 2.28
AC009041.3-201ENST00000564390 GCOM1H8Y6P7 765 aaPredicted RBP29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 TIMP1P01033 207 aa29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 POLR2MP0CAP2 368 aa29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 MYCLP12524 364 aaPredicted RBP29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 FCHSD1Q86WN1 690 aa29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 MICU3Q86XE3 530 aa29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 SRBD1Q8N5C6 995 aaKnown RBP29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 RRP36Q96EU6 259 aaKnown RBP29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 TRPV6Q9H1D0 765 aa29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 SLC12A7Q9Y666 1083 aa29.26■■■□□ 2.27
AC009041.3-201ENST00000564390 Q7L0L9 218 aa29.25■■■□□ 2.27
AC009041.3-201ENST00000564390 A6NJR5 290 aa29.24■■■□□ 2.27
AC009041.3-201ENST00000564390 B4GALT4O60513 344 aa29.24■■■□□ 2.27
AC009041.3-201ENST00000564390 ARHGAP1Q07960 439 aa29.24■■■□□ 2.27
AC009041.3-201ENST00000564390 PGM5Q15124 567 aa29.24■■■□□ 2.27
AC009041.3-201ENST00000564390 BRDTQ58F21 947 aaPredicted RBP29.24■■■□□ 2.27
AC009041.3-201ENST00000564390 ZFP91Q96JP5 570 aaPredicted RBP29.24■■■□□ 2.27
AC009041.3-201ENST00000564390 MTG1Q9BT17 334 aaPredicted RBP29.24■■■□□ 2.27
AC009041.3-201ENST00000564390 MAP3K20Q9NYL2 800 aaKnown RBP29.24■■■□□ 2.27
AC009041.3-201ENST00000564390 SEC63Q9UGP8 760 aaKnown RBP29.24■■■□□ 2.27
AC009041.3-201ENST00000564390 EIF3JO75822 258 aaKnown RBP29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 GH1P01241 217 aa29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 CALM1P0DP23 149 aa29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 CALM2P0DP24 149 aa29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 CALM3P0DP25 149 aa29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 GNAQP50148 359 aa29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 SGMS1Q86VZ5 419 aa29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 AFG1LQ8WV93 481 aa29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 LZTS2Q9BRK4 669 aa29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 MRVI1Q9Y6F6 885 aa29.23■■■□□ 2.27
AC009041.3-201ENST00000564390 hCG_1642624A0A1W2PR95 340 aa29.22■■■□□ 2.27
AC009041.3-201ENST00000564390 CYP2C18P33260 490 aa29.22■■■□□ 2.27
AC009041.3-201ENST00000564390 MFSD5Q6N075 450 aa29.22■■■□□ 2.27
AC009041.3-201ENST00000564390 CCDC82Q8N4S0 544 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms