RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 LAD1O00515 517 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 AP3B2Q13367 1082 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 ORC2Q13416 577 aaPredicted RBP19.96■□□□□ 0.79
GDE1-203ENST00000564172 EGFL6Q8IUX8 553 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 ZBTB9Q96C00 473 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 SDF4Q9BRK5 362 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 TSPY26PQ9H489 355 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 CLEC11AQ9Y240 323 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 PHIPQ8WWQ0 1821 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 ICAM1P05362 532 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 MCTP2Q6DN12 878 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 MOB2Q70IA6 237 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 ANKRD13AQ8IZ07 590 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 KIF18AQ8NI77 898 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 RBM46Q8TBY0 533 aaKnown RBP19.96■□□□□ 0.79
GDE1-203ENST00000564172 P2RX7Q99572 595 aaKnown RBP19.96■□□□□ 0.79
GDE1-203ENST00000564172 SLC38A10Q9HBR0 1119 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 MRPL11Q9Y3B7 192 aaKnown RBP19.96■□□□□ 0.79
GDE1-203ENST00000564172 SMCHD1A6NHR9 2005 aa19.96■□□□□ 0.79
GDE1-203ENST00000564172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.95■□□□□ 0.78
GDE1-203ENST00000564172 PIK3CDO00329 1044 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 NEMFO60524 1076 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 GUCY2CP25092 1073 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 CYP2C19P33261 490 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 RAD51AP2Q09MP3 1159 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 TTLL12Q14166 644 aaPredicted RBP19.95■□□□□ 0.78
GDE1-203ENST00000564172 SH3D19Q5HYK7 790 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 EPSTI1Q96J88 318 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 ANO3Q9BYT9 981 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 TMOD4Q9NZQ9 345 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 CCDC172P0C7W6 258 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 PRPHP41219 470 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 NCBP1Q09161 790 aaKnown RBP19.95■□□□□ 0.78
GDE1-203ENST00000564172 UVSSAQ2YD98 709 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 NBPF20Q3BBV1 942 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 AGBL1Q96MI9 1066 aa19.95■□□□□ 0.78
GDE1-203ENST00000564172 ABCB11O95342 1321 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 TDP2O95551 362 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 FOSP01100 380 aaPredicted RBP19.94■□□□□ 0.78
GDE1-203ENST00000564172 PPP4R3AQ6IN85 833 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 DTHD1Q6ZMT9 781 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 TBC1D5Q92609 795 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 SYMPKQ92797 1274 aaKnown RBP19.94■□□□□ 0.78
GDE1-203ENST00000564172 CLMNQ96JQ2 1002 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 CCPG1Q9ULG6 757 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 HOXA13P31271 388 aaPredicted RBP19.94■□□□□ 0.78
GDE1-203ENST00000564172 LONP1P36776 959 aaKnown RBP19.94■□□□□ 0.78
GDE1-203ENST00000564172 LONRF3Q496Y0 759 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 MAP1SQ66K74 1059 aaPredicted RBP19.94■□□□□ 0.78
GDE1-203ENST00000564172 CPXCR1Q8N123 301 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 ELP3Q9H9T3 547 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 RRAGCQ9HB90 399 aa19.94■□□□□ 0.78
GDE1-203ENST00000564172 PAPPA2Q9BXP8 1791 aa19.93■□□□□ 0.78
GDE1-203ENST00000564172 SPDYE3A6NKU9 549 aa19.93■□□□□ 0.78
GDE1-203ENST00000564172 POLR2DO15514 142 aaKnown RBP19.93■□□□□ 0.78
GDE1-203ENST00000564172 CFBP00751 764 aa19.93■□□□□ 0.78
GDE1-203ENST00000564172 OR52Z1P0C646 297 aa19.93■□□□□ 0.78
GDE1-203ENST00000564172 CCDC192P0DO97 292 aa19.93■□□□□ 0.78
GDE1-203ENST00000564172 FDX1P10109 184 aa19.93■□□□□ 0.78
GDE1-203ENST00000564172 HNRNPH2P55795 449 aaKnown RBP19.93■□□□□ 0.78
GDE1-203ENST00000564172 POTEDQ86YR6 584 aa19.93■□□□□ 0.78
GDE1-203ENST00000564172 CRYGNQ8WXF5 182 aa19.93■□□□□ 0.78
GDE1-203ENST00000564172 ATG4CQ96DT6 458 aa19.93■□□□□ 0.78
GDE1-203ENST00000564172 VWA5AO00534 786 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 PRR29P0C7W0 189 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 USP11P51784 963 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 SATB1Q01826 763 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 PPATQ06203 517 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 MUM1L1Q5H9M0 696 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 CATSPERGQ6ZRH7 1159 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 ERO1BQ86YB8 467 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 RAVER2Q9HCJ3 691 aaKnown RBP19.92■□□□□ 0.78
GDE1-203ENST00000564172 GCOM1H8Y6P7 765 aaPredicted RBP19.92■□□□□ 0.78
GDE1-203ENST00000564172 SLC37A4O43826 429 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 ZBED4O75132 1171 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 POLR2MP0CAP2 368 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 COG2Q14746 738 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 KRBA2Q6ZNG9 492 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 ARMC9Q7Z3E5 817 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 PDILTQ8N807 584 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 MTMR9Q96QG7 549 aa19.92■□□□□ 0.78
GDE1-203ENST00000564172 IRF6O14896 467 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 GCFC2P16383 781 aaKnown RBP19.91■□□□□ 0.78
GDE1-203ENST00000564172 DSG3P32926 999 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 WNK4Q96J92 1243 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 OTOFQ9HC10 1997 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 SPDYE5A6NIY4 337 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 TRAF5O00463 557 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 ARHGAP4P98171 946 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 TYRO3Q06418 890 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 CNNM3Q8NE01 707 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 ERCC4Q92889 916 aaPredicted RBP19.91■□□□□ 0.78
GDE1-203ENST00000564172 OTUD5Q96G74 571 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 NAP1L4Q99733 375 aaKnown RBP19.91■□□□□ 0.78
GDE1-203ENST00000564172 DDX25Q9UHL0 483 aaKnown RBP19.91■□□□□ 0.78
GDE1-203ENST00000564172 ADAMTS5Q9UNA0 930 aa19.91■□□□□ 0.78
GDE1-203ENST00000564172 CTDP1Q9Y5B0 961 aaPredicted RBP19.91■□□□□ 0.78
GDE1-203ENST00000564172 A0A087X0B3 334 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 SREBF1P36956 1147 aa19.9■□□□□ 0.78
GDE1-203ENST00000564172 CALCRLQ16602 461 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms