RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 SUPT3HO75486 399 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 DNAJA1P31689 397 aaKnown RBP6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 PDE3AQ14432 1141 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 STK38Q15208 465 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 LETM2Q2VYF4 491 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 LRSAM1Q6UWE0 723 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 SRGAP1Q7Z6B7 1085 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 FCHSD1Q86WN1 690 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 GATAD2AQ86YP4 633 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 SPARTQ8N0X7 666 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 RTEL1Q9NZ71 1219 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 PARD3Q8TEW0 1356 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 SULT1B1O43704 296 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 KCNJ13O60928 360 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 TRPA1O75762 1119 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 EPN2O95208 641 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 SLC4A1P02730 911 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 PCNAP12004 261 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 EIF2S2P20042 333 aaKnown RBP6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 CNGA1P29973 690 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 MXRA7P84157 204 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 ATP2B2Q01814 1243 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 ELF2Q15723 593 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZSCAN23Q3MJ62 389 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 BRDTQ58F21 947 aaPredicted RBP6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZBTB41Q5SVQ8 909 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 ANKRD42Q8N9B4 389 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 NGLY1Q96IV0 654 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 NLRP3Q96P20 1036 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 GBP3Q9H0R5 595 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 MAP3K5Q99683 1374 aa6.51□□□□□ -1.37
TUBGCP4-207ENST00000563963 IQANK1A0A1B0GTG1 560 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 STMND1H3BQB6 276 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CFAP100Q494V2 611 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 INTS8Q75QN2 995 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCAR2Q8N163 923 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 MAGEC3Q8TD91 643 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 DHX58Q96C10 678 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 TCF12Q99081 682 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 PRPF18Q99633 342 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 FOXP3Q9BZS1 431 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 VPS37BQ9H9H4 285 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CNGB3Q9NQW8 809 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 STRIP2Q9ULQ0 834 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 TTC7AQ9ULT0 858 aaPredicted RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 SCAF8Q9UPN6 1271 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 TNRQ92752 1358 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 ELP1O95163 1332 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZNF3P17036 446 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 HSD3B2P26439 372 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 ANXA13P27216 316 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 MRPS15P82914 257 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 UBXN1Q04323 297 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCDC14Q49A88 953 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCDC62Q6P9F0 684 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCHCR1Q8TD31 782 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 RABGGTAQ92696 567 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 PCMTD1Q96MG8 357 aaPredicted RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 NLRP4Q96MN2 994 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CGREF1Q99674 301 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 ATAD3AQ9NVI7 634 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 EXOC7Q9UPT5 735 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 NCOA3Q9Y6Q9 1424 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 MYPNQ86TC9 1320 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 HTR3EA5X5Y0 456 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 SPDYE16A6NNV3 312 aaPredicted RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 PSMD14O00487 310 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 XPOTO43592 962 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 TCEA3O75764 348 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 DDX5P17844 614 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 HSD17B2P37059 387 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 PDE6CP51160 858 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 WDR45BQ5MNZ6 344 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZNF746Q6NUN9 644 aaPredicted RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 NLRP14Q86W24 1093 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 OSBP2Q969R2 916 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 ALPK1Q96QP1 1244 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 PTPRHQ9HD43 1115 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 BLMP54132 1417 aaPredicted RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 VWDEQ8N2E2 1590 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCDC162PA2VCL2 907 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 GOLGA8JA6NMD2 632 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCDC169A6NNP5 214 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 GOLGA8TH3BQL2 631 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 RTCAO00442 366 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 GUCY1B2O75343 617 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 RECKO95980 971 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 GOLGA8HP0CJ92 632 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 SP140Q13342 867 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 HLTFQ14527 1009 aaKnown RBP eCLIP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 MIS18BP1Q6P0N0 1132 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 TAS1R3Q7RTX0 852 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 KRT27Q7Z3Y8 459 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 GFM2Q969S9 779 aaKnown RBP6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 SNF8Q96H20 258 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 CYP4F11Q9HBI6 524 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 GPR108Q9NPR9 543 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 PFDN4Q9NQP4 134 aa6.5□□□□□ -1.37
TUBGCP4-207ENST00000563963 KLC4Q9NSK0 619 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms