RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 MKL1Q969V6 931 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 IL1RAPL2Q9NP60 686 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 FAM86C1Q9NVL1 165 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 CLDND1Q9NY35 253 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 INSL6Q9Y581 213 aa18.91■□□□□ 0.62
RNF40-205ENST00000563909 GREB1LQ9C091 1923 aaPredicted RBP18.9■□□□□ 0.62
RNF40-205ENST00000563909 NBNO60934 754 aa18.9■□□□□ 0.62
RNF40-205ENST00000563909 IKBKEQ14164 716 aa18.9■□□□□ 0.62
RNF40-205ENST00000563909 COL19A1Q14993 1142 aa18.9■□□□□ 0.62
RNF40-205ENST00000563909 PKN1Q16512 942 aa18.9■□□□□ 0.62
RNF40-205ENST00000563909 MUM1L1Q5H9M0 696 aa18.9■□□□□ 0.62
RNF40-205ENST00000563909 SLFN13Q68D06 897 aa18.9■□□□□ 0.62
RNF40-205ENST00000563909 NSMFQ6X4W1 530 aa18.9■□□□□ 0.62
RNF40-205ENST00000563909 LRRC47Q8N1G4 583 aaKnown RBP18.9■□□□□ 0.62
RNF40-205ENST00000563909 EXOC6Q8TAG9 804 aa18.9■□□□□ 0.62
RNF40-205ENST00000563909 POP1Q99575 1024 aaKnown RBP18.9■□□□□ 0.62
RNF40-205ENST00000563909 MYO15AQ9UKN7 3530 aa18.9■□□□□ 0.62
RNF40-205ENST00000563909 TECTAO75443 2155 aa18.89■□□□□ 0.62
RNF40-205ENST00000563909 IGKV6D-41A0A0C4DH26 115 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 TMEM221A6NGB7 291 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 M0R296 226 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 EFCAB14O75071 495 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 CXCL10P02778 98 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 STAT2P52630 851 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 IKQ13123 557 aaPredicted RBP18.89■□□□□ 0.61
RNF40-205ENST00000563909 EPC2Q52LR7 807 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 SUGP1Q8IWZ8 645 aaKnown RBP18.89■□□□□ 0.61
RNF40-205ENST00000563909 GMCL1P1Q8NEA9 526 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 ARPP21Q9UBL0 812 aaPredicted RBP18.89■□□□□ 0.61
RNF40-205ENST00000563909 SCN10AQ9Y5Y9 1956 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 RAD50Q92878 1312 aa18.89■□□□□ 0.61
RNF40-205ENST00000563909 RBM47A0AV96 593 aaKnown RBP18.88■□□□□ 0.61
RNF40-205ENST00000563909 A6NJR5 290 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 RBAK-RBAKDNI3L0D1 243 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 PARNO95453 639 aaKnown RBP18.88■□□□□ 0.61
RNF40-205ENST00000563909 CHGBP05060 677 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 SNAP25P60880 206 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 IRX6P78412 446 aaPredicted RBP18.88■□□□□ 0.61
RNF40-205ENST00000563909 GPM6BQ13491 265 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 SMAD2Q15796 467 aaKnown RBP18.88■□□□□ 0.61
RNF40-205ENST00000563909 CLUL1Q15846 466 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 HSP90AB4PQ58FF6 505 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 TRIM67Q6ZTA4 783 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 RHPN1Q8TCX5 695 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 CHURC1Q8WUH1 139 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 CHMP4CQ96CF2 233 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 CEP95Q96GE4 821 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 CTAGE1Q96RT6 745 aa18.88■□□□□ 0.61
RNF40-205ENST00000563909 TRIP12Q14669 1992 aaPredicted RBP18.88■□□□□ 0.61
RNF40-205ENST00000563909 LTBRP36941 435 aa18.87■□□□□ 0.61
RNF40-205ENST00000563909 SIRT2Q8IXJ6 389 aa18.87■□□□□ 0.61
RNF40-205ENST00000563909 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.87■□□□□ 0.612e-6■□□□□ 9.2
RNF40-205ENST00000563909 NSUN3Q9H649 340 aaKnown RBP18.87■□□□□ 0.61
RNF40-205ENST00000563909 PAG1Q9NWQ8 432 aa18.87■□□□□ 0.61
RNF40-205ENST00000563909 MTMR4Q9NYA4 1195 aa18.87■□□□□ 0.61
RNF40-205ENST00000563909 ADD3Q9UEY8 706 aaKnown RBP18.87■□□□□ 0.61
RNF40-205ENST00000563909 SYNPO2Q9UMS6 1093 aa18.87■□□□□ 0.61
RNF40-205ENST00000563909 WDR87Q6ZQQ6 2873 aa18.87■□□□□ 0.61
RNF40-205ENST00000563909 MINDY4BA8MYZ0 360 aa18.86■□□□□ 0.61
RNF40-205ENST00000563909 H3BNC9 293 aa18.86■□□□□ 0.61
RNF40-205ENST00000563909 TTLL1O95922 423 aa18.86■□□□□ 0.61
RNF40-205ENST00000563909 CKBP12277 381 aa18.86■□□□□ 0.61
RNF40-205ENST00000563909 GDF6Q6KF10 455 aaPredicted RBP18.86■□□□□ 0.61
RNF40-205ENST00000563909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.86■□□□□ 0.61
RNF40-205ENST00000563909 RPAINQ86UA6 219 aa18.86■□□□□ 0.61
RNF40-205ENST00000563909 FAM160B2Q86V87 743 aa18.86■□□□□ 0.61
RNF40-205ENST00000563909 CLASRPQ8N2M8 674 aaKnown RBP18.86■□□□□ 0.61
RNF40-205ENST00000563909 STAG1Q8WVM7 1258 aa18.86■□□□□ 0.61
RNF40-205ENST00000563909 DHX38Q92620 1227 aaKnown RBP18.86■□□□□ 0.61
RNF40-205ENST00000563909 ATOH1Q92858 354 aaPredicted RBP18.86■□□□□ 0.61
RNF40-205ENST00000563909 MYH4Q9Y623 1939 aa18.85■□□□□ 0.61
RNF40-205ENST00000563909 ALDH5A1P51649 535 aaPredicted RBP18.85■□□□□ 0.61
RNF40-205ENST00000563909 BAATQ14032 418 aaPredicted RBP18.85■□□□□ 0.61
RNF40-205ENST00000563909 PPP2R5BQ15173 497 aa18.85■□□□□ 0.61
RNF40-205ENST00000563909 ZNF444Q8N0Y2 327 aaPredicted RBP18.85■□□□□ 0.61
RNF40-205ENST00000563909 FBXL6Q8N531 539 aa18.85■□□□□ 0.61
RNF40-205ENST00000563909 COPS5Q92905 334 aa18.85■□□□□ 0.61
RNF40-205ENST00000563909 SAMD11Q96NU1 681 aa18.85■□□□□ 0.61
RNF40-205ENST00000563909 BCL11AQ9H165 835 aa18.85■□□□□ 0.61
RNF40-205ENST00000563909 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
RNF40-205ENST00000563909 PTPRZ1P23471 2315 aaPredicted RBP18.84■□□□□ 0.61
RNF40-205ENST00000563909 STXBP3O00186 592 aa18.84■□□□□ 0.61
RNF40-205ENST00000563909 NKRFO15226 690 aaKnown RBP eCLIP18.84■□□□□ 0.61
RNF40-205ENST00000563909 MBTPS2O43462 519 aa18.84■□□□□ 0.61
RNF40-205ENST00000563909 NCK2O43639 380 aa18.84■□□□□ 0.61
RNF40-205ENST00000563909 PRDM1O75626 825 aa18.84■□□□□ 0.61
RNF40-205ENST00000563909 AMHP03971 560 aa18.84■□□□□ 0.61
RNF40-205ENST00000563909 NEFLP07196 543 aa18.84■□□□□ 0.61
RNF40-205ENST00000563909 IFIT2P09913 472 aaKnown RBP18.84■□□□□ 0.61
RNF40-205ENST00000563909 HTRA4P83105 476 aaPredicted RBP18.84■□□□□ 0.61
RNF40-205ENST00000563909 SBK1Q52WX2 424 aa18.84■□□□□ 0.61
RNF40-205ENST00000563909 SP7Q8TDD2 431 aaPredicted RBP18.84■□□□□ 0.61
RNF40-205ENST00000563909 CCPG1Q9ULG6 757 aa18.84■□□□□ 0.61
RNF40-205ENST00000563909 MCCP23508 829 aa18.83■□□□□ 0.6
RNF40-205ENST00000563909 SLC1A4P43007 532 aa18.83■□□□□ 0.6
RNF40-205ENST00000563909 DLX2Q07687 328 aaPredicted RBP18.83■□□□□ 0.6
RNF40-205ENST00000563909 RBL2Q08999 1139 aa18.83■□□□□ 0.6
RNF40-205ENST00000563909 UBE3CQ15386 1083 aa18.83■□□□□ 0.6
RNF40-205ENST00000563909 TMEM192Q8IY95 271 aa18.83■□□□□ 0.6
RNF40-205ENST00000563909 MYOCDQ8IZQ8 938 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms