RNA–Protein interactions for RNA: ENST00000563597.5

PPP4C-206, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 3

Gene PPP4C, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-206ENST00000563597 PRC1O43663 620 aa28.82■■■□□ 2.2
PPP4C-206ENST00000563597 PPP1R11O60927 126 aaPredicted RBP28.82■■■□□ 2.2
PPP4C-206ENST00000563597 CFBP00751 764 aa28.82■■■□□ 2.2
PPP4C-206ENST00000563597 SLC35G1Q2M3R5 365 aa28.82■■■□□ 2.2
PPP4C-206ENST00000563597 HOMER1Q86YM7 354 aa28.82■■■□□ 2.2
PPP4C-206ENST00000563597 FAM126BQ8IXS8 530 aa28.82■■■□□ 2.2
PPP4C-206ENST00000563597 TMTC2Q8N394 836 aa28.82■■■□□ 2.2
PPP4C-206ENST00000563597 OR6J1Q8NGC5 347 aa28.82■■■□□ 2.2
PPP4C-206ENST00000563597 CCDC136Q96JN2 1154 aa28.82■■■□□ 2.2
PPP4C-206ENST00000563597 TMEM87BQ96K49 555 aa28.82■■■□□ 2.2
PPP4C-206ENST00000563597 OPLAHO14841 1288 aa28.81■■■□□ 2.2
PPP4C-206ENST00000563597 DDAH1O94760 285 aa28.81■■■□□ 2.2
PPP4C-206ENST00000563597 HSD17B4P51659 736 aa28.81■■■□□ 2.2
PPP4C-206ENST00000563597 TTLL4Q14679 1199 aa28.81■■■□□ 2.2
PPP4C-206ENST00000563597 BRDTQ58F21 947 aaPredicted RBP28.81■■■□□ 2.2
PPP4C-206ENST00000563597 SAMD3Q8N6K7 520 aa28.81■■■□□ 2.2
PPP4C-206ENST00000563597 PIGSQ96S52 555 aa28.81■■■□□ 2.2
PPP4C-206ENST00000563597 POLR3EQ9NVU0 708 aa28.81■■■□□ 2.2
PPP4C-206ENST00000563597 CYTH3O43739 400 aa28.8■■■□□ 2.2
PPP4C-206ENST00000563597 KIF5BP33176 963 aa28.8■■■□□ 2.2
PPP4C-206ENST00000563597 ITGA7Q13683 1181 aa28.8■■■□□ 2.2
PPP4C-206ENST00000563597 STXBP2Q15833 593 aa28.8■■■□□ 2.2
PPP4C-206ENST00000563597 RNF20Q5VTR2 975 aa28.8■■■□□ 2.2
PPP4C-206ENST00000563597 ZNF654Q8IZM8 581 aa28.8■■■□□ 2.2
PPP4C-206ENST00000563597 PNMA6FA0A0J9YX94 578 aa28.79■■■□□ 2.2
PPP4C-206ENST00000563597 CDC45O75419 566 aa28.79■■■□□ 2.2
PPP4C-206ENST00000563597 TIMP1P01033 207 aa28.79■■■□□ 2.2
PPP4C-206ENST00000563597 TXNP10599 105 aaKnown RBP28.79■■■□□ 2.2
PPP4C-206ENST00000563597 FPGSQ05932 587 aa28.79■■■□□ 2.2
PPP4C-206ENST00000563597 SHHQ15465 462 aa28.79■■■□□ 2.2
PPP4C-206ENST00000563597 ARHGEF16Q5VV41 709 aa28.79■■■□□ 2.2
PPP4C-206ENST00000563597 CTCFLQ8NI51 663 aaPredicted RBP28.79■■■□□ 2.2
PPP4C-206ENST00000563597 BAZ2BQ9UIF8 2168 aaKnown RBP28.78■■■□□ 2.2
PPP4C-206ENST00000563597 GRIN2DO15399 1336 aa28.78■■■□□ 2.2
PPP4C-206ENST00000563597 SH2B2O14492 632 aaPredicted RBP28.78■■■□□ 2.2
PPP4C-206ENST00000563597 CD4P01730 458 aa28.78■■■□□ 2.2
PPP4C-206ENST00000563597 PXMP2Q9NR77 195 aa28.78■■■□□ 2.2
PPP4C-206ENST00000563597 CCDC69A6NI79 296 aa28.77■■■□□ 2.2
PPP4C-206ENST00000563597 EIF2AK2P19525 551 aaKnown RBP28.77■■■□□ 2.2
PPP4C-206ENST00000563597 LIFRP42702 1097 aa28.77■■■□□ 2.2
PPP4C-206ENST00000563597 PURAQ00577 322 aaKnown RBP28.77■■■□□ 2.2
PPP4C-206ENST00000563597 C9orf50Q5SZB4 431 aa28.77■■■□□ 2.2
PPP4C-206ENST00000563597 NFXL1Q6ZNB6 911 aa28.77■■■□□ 2.2
PPP4C-206ENST00000563597 SPZ1Q9BXG8 430 aa28.77■■■□□ 2.2
PPP4C-206ENST00000563597 GPHNQ9NQX3 736 aaPredicted RBP28.77■■■□□ 2.2
PPP4C-206ENST00000563597 A6NJR5 290 aa28.76■■■□□ 2.19
PPP4C-206ENST00000563597 SMARCA1P28370 1054 aa28.76■■■□□ 2.19
PPP4C-206ENST00000563597 MFSD5Q6N075 450 aa28.76■■■□□ 2.19
PPP4C-206ENST00000563597 CCDC62Q6P9F0 684 aa28.76■■■□□ 2.19
PPP4C-206ENST00000563597 KPNA6O60684 536 aa28.75■■■□□ 2.19
PPP4C-206ENST00000563597 EIF3JO75822 258 aaKnown RBP28.75■■■□□ 2.19
PPP4C-206ENST00000563597 ARIH2O95376 493 aa28.75■■■□□ 2.19
PPP4C-206ENST00000563597 NR3C2P08235 984 aa28.75■■■□□ 2.19
PPP4C-206ENST00000563597 PSMC6P62333 389 aa28.75■■■□□ 2.19
PPP4C-206ENST00000563597 SEPT14Q6ZU15 432 aa28.75■■■□□ 2.19
PPP4C-206ENST00000563597 COPS5Q92905 334 aa28.75■■■□□ 2.19
PPP4C-206ENST00000563597 LZTS2Q9BRK4 669 aa28.75■■■□□ 2.19
PPP4C-206ENST00000563597 MTG1Q9BT17 334 aaPredicted RBP28.75■■■□□ 2.19
PPP4C-206ENST00000563597 MYL10Q9BUA6 226 aa28.75■■■□□ 2.19
PPP4C-206ENST00000563597 KIAA1217Q5T5P2 1943 aa28.75■■■□□ 2.19
PPP4C-206ENST00000563597 MYL3P08590 195 aa28.74■■■□□ 2.19
PPP4C-206ENST00000563597 CALM1P0DP23 149 aa28.74■■■□□ 2.19
PPP4C-206ENST00000563597 CALM2P0DP24 149 aa28.74■■■□□ 2.19
PPP4C-206ENST00000563597 CALM3P0DP25 149 aa28.74■■■□□ 2.19
PPP4C-206ENST00000563597 GNAQP50148 359 aa28.74■■■□□ 2.19
PPP4C-206ENST00000563597 DEFB123Q8N688 67 aa28.74■■■□□ 2.19
PPP4C-206ENST00000563597 GCOM1H8Y6P7 765 aaPredicted RBP28.73■■■□□ 2.19
PPP4C-206ENST00000563597 POLR2MP0CAP2 368 aa28.73■■■□□ 2.19
PPP4C-206ENST00000563597 HOXA13P31271 388 aaPredicted RBP28.73■■■□□ 2.19
PPP4C-206ENST00000563597 EPHB4P54760 987 aa28.73■■■□□ 2.19
PPP4C-206ENST00000563597 COL9A3Q14050 684 aaPredicted RBP28.73■■■□□ 2.19
PPP4C-206ENST00000563597 RRP36Q96EU6 259 aaKnown RBP28.73■■■□□ 2.19
PPP4C-206ENST00000563597 PDCD2LQ9BRP1 358 aa28.73■■■□□ 2.19
PPP4C-206ENST00000563597 GH1P01241 217 aa28.72■■■□□ 2.19
PPP4C-206ENST00000563597 TMEM199Q8N511 208 aa28.72■■■□□ 2.19
PPP4C-206ENST00000563597 PPP1R12CQ9BZL4 782 aa28.72■■■□□ 2.19
PPP4C-206ENST00000563597 B4GALT4O60513 344 aa28.71■■■□□ 2.19
PPP4C-206ENST00000563597 PPIGQ13427 754 aaKnown RBP eCLIP28.71■■■□□ 2.191e-6■□□□□ 10.8
PPP4C-206ENST00000563597 LY6KQ17RY6 165 aa28.71■■■□□ 2.19
PPP4C-206ENST00000563597 SGMS1Q86VZ5 419 aa28.71■■■□□ 2.19
PPP4C-206ENST00000563597 PIBF1Q8WXW3 757 aa28.71■■■□□ 2.19
PPP4C-206ENST00000563597 RNPC3Q96LT9 517 aaKnown RBP28.71■■■□□ 2.19
PPP4C-206ENST00000563597 ALDH8A1Q9H2A2 487 aaPredicted RBP28.71■■■□□ 2.19
PPP4C-206ENST00000563597 SEC63Q9UGP8 760 aaKnown RBP28.71■■■□□ 2.19
PPP4C-206ENST00000563597 SLC12A7Q9Y666 1083 aa28.71■■■□□ 2.19
PPP4C-206ENST00000563597 SCN10AQ9Y5Y9 1956 aa28.7■■■□□ 2.19
PPP4C-206ENST00000563597 ARHGAP1Q07960 439 aa28.7■■■□□ 2.18
PPP4C-206ENST00000563597 TSGA10IPQ3SY00 556 aa28.7■■■□□ 2.18
PPP4C-206ENST00000563597 NEK1Q96PY6 1258 aa28.7■■■□□ 2.18
PPP4C-206ENST00000563597 TRPV6Q9H1D0 765 aa28.7■■■□□ 2.18
PPP4C-206ENST00000563597 HIPK3Q9H422 1215 aa28.7■■■□□ 2.18
PPP4C-206ENST00000563597 MRVI1Q9Y6F6 885 aa28.7■■■□□ 2.18
PPP4C-206ENST00000563597 PGM5Q15124 567 aa28.69■■■□□ 2.18
PPP4C-206ENST00000563597 FAM109BQ6ICB4 259 aaPredicted RBP28.69■■■□□ 2.18
PPP4C-206ENST00000563597 Q7L0L9 218 aa28.69■■■□□ 2.18
PPP4C-206ENST00000563597 VSIG10LQ86VR7 867 aa28.69■■■□□ 2.18
PPP4C-206ENST00000563597 LRRC2Q9BYS8 371 aa28.69■■■□□ 2.18
PPP4C-206ENST00000563597 DDX41Q9UJV9 622 aaKnown RBP28.69■■■□□ 2.18
PPP4C-206ENST00000563597 PLEKHA8P1O95397 391 aa28.68■■■□□ 2.18
PPP4C-206ENST00000563597 NEFLP07196 543 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms