RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 PARP9Q8IXQ6 854 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 ZNF654Q8IZM8 581 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 TUBGCP2Q9BSJ2 902 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 SRP68Q9UHB9 627 aaKnown RBP14.07□□□□□ -0.16
CCDC187-201ENST00000563590 RWDD2AQ9UIY3 292 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 GGT7Q9UJ14 662 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 CAPN6Q9Y6Q1 641 aa14.07□□□□□ -0.16
CCDC187-201ENST00000563590 MYBL1P10243 752 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 CTNNA1P35221 906 aaKnown RBP14.06□□□□□ -0.16
CCDC187-201ENST00000563590 ASIC1P78348 528 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 PAK2Q13177 524 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 PUM3Q15397 648 aaKnown RBP14.06□□□□□ -0.16
CCDC187-201ENST00000563590 CACNA2D3Q8IZS8 1091 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 TRIM58Q8NG06 486 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 RBM12Q9NTZ6 932 aaKnown RBP14.06□□□□□ -0.16
CCDC187-201ENST00000563590 STK38LQ9Y2H1 464 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 ABCC12Q96J65 1359 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 TCRBV5S4A2TA0A5A2 114 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 TARSL2A2RTX5 802 aaKnown RBP14.06□□□□□ -0.16
CCDC187-201ENST00000563590 PDE8AO60658 829 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 TRIM37O94972 964 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 FAM153BP0C7A2 387 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 EHHADHQ08426 723 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 FAM153CQ494X1 144 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 WDR59Q6PJI9 974 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 KRT23Q9C075 422 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 CNNM2Q9H8M5 875 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 RMND1Q9NWS8 449 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 FAM153AQ9UHL3 310 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 PLAAQ9Y263 795 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 HYOU1Q9Y4L1 999 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 RIC1Q4ADV7 1423 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
CCDC187-201ENST00000563590 OPLAHO14841 1288 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 CCDC152Q4G0S7 254 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 FAM133BQ5BKY9 247 aaKnown RBP14.06□□□□□ -0.16
CCDC187-201ENST00000563590 FMNL3Q8IVF7 1028 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 SLC4A9Q96Q91 983 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 OSBPL9Q96SU4 736 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 MTRQ99707 1265 aa14.06□□□□□ -0.16
CCDC187-201ENST00000563590 SPATA31A5Q5VU36 1347 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 SPATA31A7Q8IWB4 1347 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 C6orf229H3BNL8 230 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 CHRM1P11229 460 aaPredicted RBP14.05□□□□□ -0.16
CCDC187-201ENST00000563590 CHRNDQ07001 517 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 KRT71Q3SY84 523 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 TBC1D1Q86TI0 1168 aaPredicted RBP14.05□□□□□ -0.16
CCDC187-201ENST00000563590 SPDL1Q96EA4 605 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 ISCA1Q9BUE6 129 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 EPN3Q9H201 632 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 EXOC1Q9NV70 894 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 RTCBQ9Y3I0 505 aaKnown RBP14.05□□□□□ -0.16
CCDC187-201ENST00000563590 VIMP08670 466 aaKnown RBP14.05□□□□□ -0.16
CCDC187-201ENST00000563590 BRD2P25440 801 aaKnown RBP14.05□□□□□ -0.16
CCDC187-201ENST00000563590 SATB1Q01826 763 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 CFAP221Q4G0U5 840 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 DYDC1Q8WWB3 177 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 SETDB2Q96T68 719 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 FBXO3Q9UK99 471 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 RGPD5Q99666 1765 aa14.05□□□□□ -0.16
CCDC187-201ENST00000563590 PP2D1A8MPX8 630 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 PLEKHA8P1O95397 391 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 EIF4A3P38919 411 aaKnown RBP14.04□□□□□ -0.16
CCDC187-201ENST00000563590 EPS15P42566 896 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 RBM5P52756 815 aaKnown RBP eCLIP14.04□□□□□ -0.16
CCDC187-201ENST00000563590 SLC51AQ86UW1 340 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 ARFGAP2Q8N6H7 521 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 MYCBPAPQ8TBZ2 947 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 NOVA2Q9UNW9 492 aaKnown RBP14.04□□□□□ -0.16
CCDC187-201ENST00000563590 THRAP3Q9Y2W1 955 aaKnown RBP14.04□□□□□ -0.16
CCDC187-201ENST00000563590 TNKSO95271 1327 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 GSG1L2A8MUP6 293 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 PHF20L1A8MW92 1017 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 IFNAR2P48551 515 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 GSCP56915 257 aaPredicted RBP14.04□□□□□ -0.16
CCDC187-201ENST00000563590 ITPK1Q13572 414 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 ALX1Q15699 326 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 IRF2BP1Q8IU81 584 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 MIEF2Q96C03 454 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 SNX12Q9UMY4 172 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 TJP1Q07157 1748 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 ATRNO75882 1429 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 PCCAP05165 728 aaPredicted RBP14.04□□□□□ -0.16
CCDC187-201ENST00000563590 PDE4DQ08499 809 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 ALS2CLQ60I27 953 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 TRIM68Q6AZZ1 485 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 CYB5D1Q6P9G0 228 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 ADAT2Q7Z6V5 191 aaKnown RBP14.04□□□□□ -0.16
CCDC187-201ENST00000563590 TEX11Q8IYF3 940 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 LPIN2Q92539 896 aa14.04□□□□□ -0.16
CCDC187-201ENST00000563590 DIXDC1Q155Q3 683 aa14.03□□□□□ -0.16
CCDC187-201ENST00000563590 PTGISQ16647 500 aa14.03□□□□□ -0.16
CCDC187-201ENST00000563590 EMBQ6PCB8 327 aa14.03□□□□□ -0.16
CCDC187-201ENST00000563590 ZSCAN29Q8IWY8 852 aaPredicted RBP14.03□□□□□ -0.16
CCDC187-201ENST00000563590 FAM167BQ9BTA0 163 aa14.03□□□□□ -0.16
CCDC187-201ENST00000563590 DPH5Q9H2P9 285 aa14.03□□□□□ -0.16
CCDC187-201ENST00000563590 GRIN2DO15399 1336 aa14.03□□□□□ -0.16
CCDC187-201ENST00000563590 CEP104O60308 925 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms