RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 DCTN1Q14203 1278 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 TAF7Q15545 349 aaPredicted RBP5.91□□□□□ -1.46
CDR2-203ENST00000563573 DNAJC14Q6Y2X3 702 aaPredicted RBP5.91□□□□□ -1.46
CDR2-203ENST00000563573 SYDE1Q6ZW31 735 aaPredicted RBP5.91□□□□□ -1.46
CDR2-203ENST00000563573 MCM10Q7L590 875 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 SLFN12Q8IYM2 578 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 TRMT2AQ8IZ69 625 aaKnown RBP5.91□□□□□ -1.46
CDR2-203ENST00000563573 FAM13CQ8NE31 585 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 GATAD2BQ8WXI9 593 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 MYLIPQ8WY64 445 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 DHX38Q92620 1227 aaKnown RBP5.91□□□□□ -1.46
CDR2-203ENST00000563573 DPH2Q9BQC3 489 aaPredicted RBP5.91□□□□□ -1.46
CDR2-203ENST00000563573 RSRP1Q9BUV0 290 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 CHMP4AQ9BY43 222 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 IFT57Q9NWB7 429 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 BABAM1Q9NWV8 329 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 TLR6Q9Y2C9 796 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 MAP3K5Q99683 1374 aa5.91□□□□□ -1.46
CDR2-203ENST00000563573 KAT6BQ8WYB5 2073 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 SLIT2O94813 1529 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 NFIBO00712 420 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 RNMTO43148 476 aaKnown RBP5.9□□□□□ -1.46
CDR2-203ENST00000563573 CT47B1P0C2W7 299 aaPredicted RBP5.9□□□□□ -1.46
CDR2-203ENST00000563573 PHKG2P15735 406 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 VPS72Q15906 364 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 DDB1Q16531 1140 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 FBLN7Q53RD9 439 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 PRR23BQ6ZRT6 265 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 CREG2Q8IUH2 290 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.9□□□□□ -1.46
CDR2-203ENST00000563573 RNF141Q8WVD5 230 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 DUSP15Q9H1R2 295 aaPredicted RBP5.9□□□□□ -1.46
CDR2-203ENST00000563573 RNF19AQ9NV58 838 aa5.9□□□□□ -1.46
CDR2-203ENST00000563573 TRPC5Q9UL62 973 aaPredicted RBP5.9□□□□□ -1.46
CDR2-203ENST00000563573 SPATA31A1Q5TZJ5 1347 aa5.9□□□□□ -1.47
CDR2-203ENST00000563573 SPATA31A5Q5VU36 1347 aa5.9□□□□□ -1.47
CDR2-203ENST00000563573 SPATA31A7Q8IWB4 1347 aa5.9□□□□□ -1.47
CDR2-203ENST00000563573 PCDH11XQ9BZA7 1347 aa5.9□□□□□ -1.47
CDR2-203ENST00000563573 PCDH11YQ9BZA8 1340 aa5.9□□□□□ -1.47
CDR2-203ENST00000563573 NRAPQ86VF7 1730 aa5.9□□□□□ -1.47
CDR2-203ENST00000563573 PKD1L3Q7Z443 1732 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.89□□□□□ -1.47
CDR2-203ENST00000563573 SCN11AQ9UI33 1791 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 FAM221AA4D161 298 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 SRFP11831 508 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 GAB4Q2WGN9 574 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 TMCO4Q5TGY1 634 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 ZNF772Q68DY9 489 aaPredicted RBP5.89□□□□□ -1.47
CDR2-203ENST00000563573 TSPYL5Q86VY4 417 aaPredicted RBP5.89□□□□□ -1.47
CDR2-203ENST00000563573 LILRA2Q8N149 483 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 OXR1Q8N573 874 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 IL17REQ8NFR9 667 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 Q96M66 194 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 TMEM74Q96NL1 305 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 BCL11AQ9H165 835 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 EPB41L4BQ9H329 900 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 NSUN3Q9H649 340 aaKnown RBP5.89□□□□□ -1.47
CDR2-203ENST00000563573 DUSP13Q9UII6 198 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 TSPYL4Q9UJ04 414 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 RCAN3Q9UKA8 241 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 SUPT16HQ9Y5B9 1047 aaKnown RBP5.89□□□□□ -1.47
CDR2-203ENST00000563573 AFF2P51816 1311 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 OVOS2A0A0G2JMS6 1433 aa5.89□□□□□ -1.47
CDR2-203ENST00000563573 WNK3Q9BYP7 1800 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 DNAJC25-GNG10A0A024R161 153 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 ERVV-2B6SEH9 535 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 CHL1O00533 1208 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 PF4P02776 101 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 HPXP02790 462 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 CTSHP09668 335 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 TMEM253P0C7T8 217 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 ZNF853P0CG23 659 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 GBP2P32456 591 aaPredicted RBP5.88□□□□□ -1.47
CDR2-203ENST00000563573 TNNI2P48788 182 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 HK2P52789 917 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 CHMP4BP1P59074 171 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 EXOSC9Q06265 439 aaKnown RBP5.88□□□□□ -1.47
CDR2-203ENST00000563573 BNC2Q6ZN30 1099 aaPredicted RBP5.88□□□□□ -1.47
CDR2-203ENST00000563573 DTWD2Q8NBA8 298 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 PDZD8Q8NEN9 1154 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 PPP1R13LQ8WUF5 828 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 TSR2Q969E8 191 aaKnown RBP5.88□□□□□ -1.47
CDR2-203ENST00000563573 ZNF428Q96B54 188 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 CCDC74BQ96LY2 380 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 THUMPD2Q9BTF0 503 aaKnown RBP5.88□□□□□ -1.47
CDR2-203ENST00000563573 ASPNQ9BXN1 380 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 DCP1AQ9NPI6 582 aaPredicted RBP5.88□□□□□ -1.47
CDR2-203ENST00000563573 BCL9LQ86UU0 1499 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 MEGF6O75095 1541 aa5.88□□□□□ -1.47
CDR2-203ENST00000563573 CYP27B1O15528 508 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 F13A1P00488 732 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 EGR3Q06889 387 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 MPP2Q14168 576 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 TWISTNBQ3B726 338 aaPredicted RBP5.87□□□□□ -1.47
CDR2-203ENST00000563573 RALGPS1Q5JS13 557 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 FBXO33Q7Z6M2 555 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 SPPL2CQ8IUH8 684 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 SIAH1Q8IUQ4 282 aa5.87□□□□□ -1.47
CDR2-203ENST00000563573 TTC5Q8N0Z6 440 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms