RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 TMEM232C9JQI7 657 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 M0R2N6 131 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 WDR46O15213 610 aaKnown RBP11.04□□□□□ -0.64
UBFD1-202ENST00000563366 DDNO94850 711 aaPredicted RBP11.04□□□□□ -0.64
UBFD1-202ENST00000563366 SLURP2P0DP57 97 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 LIG1P18858 919 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 EPS15P42566 896 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 RRP1BQ14684 758 aaKnown RBP11.04□□□□□ -0.64
UBFD1-202ENST00000563366 CDC37Q16543 378 aaPredicted RBP11.04□□□□□ -0.64
UBFD1-202ENST00000563366 ARL6IP4Q66PJ3 421 aaKnown RBP11.04□□□□□ -0.64
UBFD1-202ENST00000563366 BRICD5Q6PL45 260 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 RASGRP2Q7LDG7 609 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 SCYL3Q8IZE3 742 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 TRPM4Q8TD43 1214 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 USB1Q9BQ65 265 aaKnown RBP11.04□□□□□ -0.64
UBFD1-202ENST00000563366 KIAA1683Q9H0B3 1180 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 CPVLQ9H3G5 476 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 RIC8AQ9NPQ8 531 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 PICK1Q9NRD5 415 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 HOOK1Q9UJC3 728 aaKnown RBP11.04□□□□□ -0.64
UBFD1-202ENST00000563366 ZNF112Q9UJU3 913 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 FEM1BQ9UK73 627 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 PCDHA6Q9UN73 950 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 PCDHB6Q9Y5E3 794 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 PCDHA8Q9Y5H6 950 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 SRPRBQ9Y5M8 271 aaKnown RBP11.04□□□□□ -0.64
UBFD1-202ENST00000563366 POLR2AP24928 1970 aaKnown RBP11.04□□□□□ -0.64
UBFD1-202ENST00000563366 PHIPQ8WWQ0 1821 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 WDR90Q96KV7 1748 aa11.04□□□□□ -0.64
UBFD1-202ENST00000563366 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 FAM237AA0A1B0GTK4 181 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 A0A1W2PRG0 241 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 USP17L10C9JJH3 530 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 CAVIN2O95810 425 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 CCDC192P0DO97 292 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 NF2P35240 595 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 DEKP35659 375 aaKnown RBP11.03□□□□□ -0.64
UBFD1-202ENST00000563366 SLC16A2P36021 539 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 ECE1P42892 770 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 JAG1P78504 1218 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 ATP2C1P98194 919 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-202ENST00000563366 AP3B2Q13367 1082 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 SHROOM1Q2M3G4 852 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-202ENST00000563366 QRICH1Q2TAL8 776 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 AXDND1Q5T1B0 1012 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-202ENST00000563366 NBPF12Q5TAG4 269 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-202ENST00000563366 RESP18Q5W5W9 173 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 FBXO11Q86XK2 927 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 LRRN4Q8WUT4 740 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 ANP32BQ92688 251 aaKnown RBP11.03□□□□□ -0.64
UBFD1-202ENST00000563366 TIGD1Q96MW7 591 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 TSPY26PQ9H489 355 aa11.03□□□□□ -0.64
UBFD1-202ENST00000563366 HMX1Q9NP08 348 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-202ENST00000563366 PARP14Q460N5 1801 aa11.02□□□□□ -0.64
UBFD1-202ENST00000563366 VEGFAP15692 232 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-202ENST00000563366 MARCKSP29966 332 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-202ENST00000563366 TXLNAP40222 546 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 PRPHP41219 470 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 ABL2P42684 1182 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 PTPN5P54829 565 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 COPS2P61201 443 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 ZRSR1Q15695 479 aaKnown RBP11.02□□□□□ -0.65
UBFD1-202ENST00000563366 NOL9Q5SY16 702 aaKnown RBP11.02□□□□□ -0.65
UBFD1-202ENST00000563366 DESI1Q6ICB0 168 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 TTBK2Q6IQ55 1244 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 RBM43Q6ZSC3 357 aaKnown RBP11.02□□□□□ -0.65
UBFD1-202ENST00000563366 NEK8Q86SG6 692 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 FMR1NBQ8N0W7 255 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-202ENST00000563366 ENGASEQ8NFI3 743 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 ACER1Q8TDN7 264 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 WRNIP1Q96S55 665 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 WDR18Q9BV38 432 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 PSTPIP2Q9H939 334 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 GRPEL1Q9HAV7 217 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 FBXO2Q9UK22 296 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-202ENST00000563366 PCDHA1Q9Y5I3 950 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 OTOFQ9HC10 1997 aa11.02□□□□□ -0.65
UBFD1-202ENST00000563366 ASTN2O75129 1339 aaPredicted RBP11.02□□□□□ -0.65
UBFD1-202ENST00000563366 GLTPD2A6NH11 291 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 C19orf81C9J6K1 198 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 PPP1R12BO60237 982 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-202ENST00000563366 FOSP01100 380 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-202ENST00000563366 PFKFB1P16118 471 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 GCFC2P16383 781 aaKnown RBP11.01□□□□□ -0.65
UBFD1-202ENST00000563366 ATP2B1P20020 1258 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 LONP1P36776 959 aaKnown RBP11.01□□□□□ -0.65
UBFD1-202ENST00000563366 SYKP43405 635 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 HIRAP54198 1017 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-202ENST00000563366 SNW1Q13573 536 aaKnown RBP11.01□□□□□ -0.65
UBFD1-202ENST00000563366 FAM83BQ5T0W9 1011 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 KANK3Q6NY19 840 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 SASS6Q6UVJ0 657 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 PNMA8AQ86V59 439 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-202ENST00000563366 ELOA2Q8IYF1 753 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-202ENST00000563366 SPICE1Q8N0Z3 855 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 PRPF38AQ8NAV1 312 aaKnown RBP11.01□□□□□ -0.65
UBFD1-202ENST00000563366 COA7Q96BR5 231 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 THAP11Q96EK4 314 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 SDF4Q9BRK5 362 aa11.01□□□□□ -0.65
UBFD1-202ENST00000563366 USP25Q9UHP3 1055 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms