RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 ZSWIM6Q9HCJ5 1215 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 CLIP2Q9UDT6 1046 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
RPAP1-205ENST00000563293 MYH4Q9Y623 1939 aa11.03□□□□□ -0.64
RPAP1-205ENST00000563293 LCTP09848 1927 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 PTPRSQ13332 1948 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 E7EWF7 191 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 ORC4O43929 436 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 LPXNO60711 386 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 ZBED4O75132 1171 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 TAP1Q03518 808 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 BECN1Q14457 450 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 CCDC178Q5BJE1 867 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 PPP4R3BQ5MIZ7 849 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 TAPT1Q6NXT6 567 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 RUFY3Q7L099 469 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 DHX32Q7L7V1 743 aaKnown RBP11.02□□□□□ -0.65
RPAP1-205ENST00000563293 EEPD1Q7L9B9 569 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 TLK2Q86UE8 772 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 ARNTL2Q8WYA1 636 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 SNX21Q969T3 373 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 JAKMIP1Q96N16 626 aaKnown RBP11.02□□□□□ -0.65
RPAP1-205ENST00000563293 KIF2CQ99661 725 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 MTIF3Q9H2K0 278 aaKnown RBP11.02□□□□□ -0.65
RPAP1-205ENST00000563293 HCN4Q9Y3Q4 1203 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 ARIH1Q9Y4X5 557 aaPredicted RBP11.02□□□□□ -0.65
RPAP1-205ENST00000563293 C5orf42Q9H799 3197 aa11.02□□□□□ -0.65
RPAP1-205ENST00000563293 USP34Q70CQ2 3546 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 IGKV6D-41A0A0C4DH26 115 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 GPR37L1O60883 481 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 CASTP20810 708 aaKnown RBP11.01□□□□□ -0.65
RPAP1-205ENST00000563293 MCM5P33992 734 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 SNAP25P60880 206 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 HAND2P61296 217 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 SART3Q15020 963 aaKnown RBP11.01□□□□□ -0.65
RPAP1-205ENST00000563293 AAK1Q2M2I8 961 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 TMEM67Q5HYA8 995 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 TMCO2Q7Z6W1 182 aaPredicted RBP11.01□□□□□ -0.65
RPAP1-205ENST00000563293 FBXO16Q8IX29 292 aaPredicted RBP11.01□□□□□ -0.65
RPAP1-205ENST00000563293 RPUSD2Q8IZ73 545 aaKnown RBP11.01□□□□□ -0.65
RPAP1-205ENST00000563293 TMTC2Q8N394 836 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 ESR2Q92731 530 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 A1CFQ9NQ94 594 aaKnown RBP11.01□□□□□ -0.65
RPAP1-205ENST00000563293 NYAP2Q9P242 653 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 ZNF536O15090 1300 aa11.01□□□□□ -0.65
RPAP1-205ENST00000563293 TRIP12Q14669 1992 aaPredicted RBP11.01□□□□□ -0.65
RPAP1-205ENST00000563293 LCHNA4D1U4 455 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 PRDM1O75626 825 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 CABYRO75952 493 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 RPS6KB1P23443 525 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 NEK4P51957 841 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 GRB10Q13322 594 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 IQCA1Q86XH1 822 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 ZNF444Q8N0Y2 327 aaPredicted RBP11□□□□□ -0.65
RPAP1-205ENST00000563293 LRRC47Q8N1G4 583 aaKnown RBP11□□□□□ -0.65
RPAP1-205ENST00000563293 CHST13Q8NET6 341 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 TMEM87BQ96K49 555 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 MKNK2Q9HBH9 465 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 PDRG1Q9NUG6 133 aa11□□□□□ -0.65
RPAP1-205ENST00000563293 PI4K2BG5E9Z4 385 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 GTPBP6O43824 516 aaPredicted RBP10.99□□□□□ -0.65
RPAP1-205ENST00000563293 MUM1L1Q5H9M0 696 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 RASGRP2Q7LDG7 609 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 TBC1D10CQ8IV04 446 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 MB21D2Q8IYB1 491 aaPredicted RBP10.99□□□□□ -0.65
RPAP1-205ENST00000563293 HLA-CQ95604 372 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 MKL1Q969V6 931 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 CEP95Q96GE4 821 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 AP5M1Q9H0R1 490 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 TCP11L1Q9NUJ3 509 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 COG5Q9UP83 839 aa10.99□□□□□ -0.65
RPAP1-205ENST00000563293 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.99□□□□□ -0.65
RPAP1-205ENST00000563293 COL4A4P53420 1690 aaPredicted RBP10.98□□□□□ -0.65
RPAP1-205ENST00000563293 ERICH2A1L162 156 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 TMEM232C9JQI7 657 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 FGD1P98174 961 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 EXOSC10Q01780 885 aaKnown RBP10.98□□□□□ -0.65
RPAP1-205ENST00000563293 CTDSPL2Q05D32 466 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 GPNMBQ14956 572 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 ADCK5Q3MIX3 580 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 STOX1Q6ZVD7 989 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 HERC6Q8IVU3 1022 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 HSCBQ8IWL3 235 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 ZSCAN31Q96LW9 406 aaPredicted RBP10.98□□□□□ -0.65
RPAP1-205ENST00000563293 ACAD9Q9H845 621 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 TOMM22Q9NS69 142 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 RNF146Q9NTX7 359 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 FBXO40Q9UH90 709 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 FEM1BQ9UK73 627 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 CTDP1Q9Y5B0 961 aaPredicted RBP10.98□□□□□ -0.65
RPAP1-205ENST00000563293 TNKSO95271 1327 aa10.98□□□□□ -0.65
RPAP1-205ENST00000563293 B4E1Z4 1266 aa10.97□□□□□ -0.65
RPAP1-205ENST00000563293 RANBP6O60518 1105 aaKnown RBP10.97□□□□□ -0.65
RPAP1-205ENST00000563293 IQCF3P0C7M6 154 aa10.97□□□□□ -0.65
RPAP1-205ENST00000563293 LIFRP42702 1097 aa10.97□□□□□ -0.65
RPAP1-205ENST00000563293 OAZ1P54368 228 aa10.97□□□□□ -0.65
RPAP1-205ENST00000563293 PURAQ00577 322 aaKnown RBP10.97□□□□□ -0.65
RPAP1-205ENST00000563293 TCTN1Q2MV58 587 aa10.97□□□□□ -0.65
RPAP1-205ENST00000563293 SLFN13Q68D06 897 aa10.97□□□□□ -0.65
RPAP1-205ENST00000563293 IQSEC1Q6DN90 963 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms