RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 SLC27A2O14975 620 aa17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 ARIH2O95376 493 aa17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 EIF2AK2P19525 551 aaKnown RBP17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 HOXA13P31271 388 aaPredicted RBP17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 TROAPQ12815 778 aa17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 MTMR8Q96EF0 704 aa17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 RNPC3Q96LT9 517 aaKnown RBP17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 FAM161BQ96MY7 647 aa17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 TRPV6Q9H1D0 765 aa17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 LRRC37A2A6NM11 1700 aa17.72■□□□□ 0.43
LPCAT4-204ENST00000563240 SZT2Q5T011 3432 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 OPLAHO14841 1288 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 PRC1O43663 620 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 CYTH3O43739 400 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 CPT1AP50416 773 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 CHMP4BP1P59074 171 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 COL9A3Q14050 684 aaPredicted RBP17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 TTLL4Q14679 1199 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 CREB3L3Q68CJ9 461 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 GPR153Q6NV75 609 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 CASC1Q6TDU7 716 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 SLC43A3Q8NBI5 491 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 RIOX1Q9H6W3 641 aa17.71■□□□□ 0.43
LPCAT4-204ENST00000563240 LAMA3Q16787 3333 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 CD4P01730 458 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 ACRP10323 421 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 CSF2RAP15509 400 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 CYP2C18P33260 490 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 PURAQ00577 322 aaKnown RBP17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 STXBP2Q15833 593 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 LY6KQ17RY6 165 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 FAM47CQ5HY64 1035 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 MFSD5Q6N075 450 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 LY9Q9HBG7 655 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 POLR3EQ9NVU0 708 aa17.7■□□□□ 0.42
LPCAT4-204ENST00000563240 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 B4GALT4O60513 344 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 NR3C2P08235 984 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 MYCLP12524 364 aaPredicted RBP17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 RXRAP19793 462 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 MCM5P33992 734 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 HSD17B4P51659 736 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 BRDTQ58F21 947 aaPredicted RBP17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 FCHSD1Q86WN1 690 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 RAB11FIP4Q86YS3 637 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 ZNF654Q8IZM8 581 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 ZFP91Q96JP5 570 aaPredicted RBP17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 MTG1Q9BT17 334 aaPredicted RBP17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 LRRC2Q9BYS8 371 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 PXMP2Q9NR77 195 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 MTMR10Q9NXD2 777 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 UMODL1Q5DID0 1318 aa17.69■□□□□ 0.42
LPCAT4-204ENST00000563240 PNMA6FA0A0J9YX94 578 aa17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 CCL23P55773 120 aa17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 CCDC62Q6P9F0 684 aa17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 C16orf59Q7L2K0 433 aa17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 TMEM199Q8N511 208 aa17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 CTCFLQ8NI51 663 aaPredicted RBP17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 AFG1LQ8WV93 481 aa17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 CCDC136Q96JN2 1154 aa17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.68■□□□□ 0.421e-7■■■■□ 20
LPCAT4-204ENST00000563240 MAF1Q9H063 256 aa17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 HIPK3Q9H422 1215 aa17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 TRMT13Q9NUP7 481 aaKnown RBP17.68■□□□□ 0.42
LPCAT4-204ENST00000563240 CCDC69A6NI79 296 aa17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 A6NJR5 290 aa17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 GCOM1H8Y6P7 765 aaPredicted RBP17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 SH2B2O14492 632 aaPredicted RBP17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 SORBS3O60504 671 aa17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 POLR2MP0CAP2 368 aa17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 PPIGQ13427 754 aaKnown RBP eCLIP17.67■□□□□ 0.422e-12■■■■■ 48.2
LPCAT4-204ENST00000563240 NBPF20Q3BBV1 942 aa17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 ZNF697Q5TEC3 545 aa17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 ALDH8A1Q9H2A2 487 aaPredicted RBP17.67■□□□□ 0.42
LPCAT4-204ENST00000563240 EIF3JO75822 258 aaKnown RBP17.66■□□□□ 0.42
LPCAT4-204ENST00000563240 DDAH1O94760 285 aa17.66■□□□□ 0.42
LPCAT4-204ENST00000563240 GH1P01241 217 aa17.66■□□□□ 0.42
LPCAT4-204ENST00000563240 CYP2C9P11712 490 aa17.66■□□□□ 0.42
LPCAT4-204ENST00000563240 KIF5BP33176 963 aa17.66■□□□□ 0.42
LPCAT4-204ENST00000563240 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
LPCAT4-204ENST00000563240 PDCD2LQ9BRP1 358 aa17.66■□□□□ 0.42
LPCAT4-204ENST00000563240 DDX41Q9UJV9 622 aaKnown RBP17.66■□□□□ 0.42
LPCAT4-204ENST00000563240 MRVI1Q9Y6F6 885 aa17.66■□□□□ 0.42
LPCAT4-204ENST00000563240 KPNA6O60684 536 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 CDC45O75419 566 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 PLEKHA8P1O95397 391 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 ARHGAP1Q07960 439 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 TRAF1Q13077 416 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 ZNF365Q70YC5 407 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 TMTC2Q8N394 836 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 IL31RAQ8NI17 732 aa17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 RRP36Q96EU6 259 aaKnown RBP17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 NOC4LQ9BVI4 516 aaKnown RBP17.65■□□□□ 0.42
LPCAT4-204ENST00000563240 SEZ6LQ9BYH1 1024 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms