RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 MTRF1O75570 445 aaKnown RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 DGKIO75912 1065 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 HSD3B1P14060 373 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 RPS6KB1P23443 525 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 PHKA1P46020 1223 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 COL9A2Q14055 689 aaPredicted RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 PKN1Q16512 942 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 LRCH2Q5VUJ6 765 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 MRM1Q6IN84 353 aaKnown RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 VSIG1Q86XK7 387 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 MYLK4Q86YV6 388 aaPredicted RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 UTP15Q8TED0 518 aaKnown RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 ZNF296Q8WUU4 475 aaPredicted RBP5.39□□□□□ -1.55
SMG1-207ENST00000563235 CSRNP1Q96S65 589 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 LRRC4BQ9NT99 713 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 DACT1Q9NYF0 836 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 POLIQ9UNA4 740 aa5.39□□□□□ -1.55
SMG1-207ENST00000563235 CCDC66A2RUB6 948 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 FAM205CA6NFA0 338 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 BTBD11A6QL63 1104 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ESPNB1AK53 854 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 M0QX08 132 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 HOXC11O43248 304 aaPredicted RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 COBLO75128 1261 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 STAM2O75886 525 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 IARSP41252 1262 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 GRK6P43250 576 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ZNF252P-AS1Q0IIN9 211 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 PRPF4BQ13523 1007 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 KIF4BQ2VIQ3 1234 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 AP1ARQ63HQ0 302 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 LIN54Q6MZP7 749 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 DPY19L2Q6NUT2 758 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ARHGAP27Q6ZUM4 889 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ZNF619Q8N2I2 560 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 CBARPQ8N350 705 aaPredicted RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 CCDC191Q8NCU4 936 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 IL17RDQ8NFM7 739 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 KCNK17Q96T54 332 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 BAG1Q99933 345 aaPredicted RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 NCAPGQ9BPX3 1015 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ISCA1Q9BUE6 129 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 APOL5Q9BWW9 433 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 TEX13AQ9BXU3 409 aaPredicted RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 NIFKQ9BYG3 293 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 WDR12Q9GZL7 423 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 ACAD9Q9H845 621 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ZNHIT6Q9NWK9 470 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 PPP4R2Q9NY27 417 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 LRRC72A6NJI9 287 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 SART1O43290 800 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 CLASP2O75122 1294 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 EIF4A3P38919 411 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 TM4SF4P48230 202 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 TUBP50607 506 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 IL1RL1Q01638 556 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ANKRD1Q15327 319 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 MUM1L1Q5H9M0 696 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 SLC27A3Q5K4L6 730 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 SWT1Q5T5J6 900 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 FOXB2Q5VYV0 432 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 LRRC43Q8N309 656 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 KIF1BPQ96EK5 621 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ESYT1Q9BSJ8 1104 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 YIPF2Q9BWQ6 316 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ITM2CQ9NQX7 267 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ACTR10Q9NZ32 417 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 SUCOQ9UBS9 1254 aaKnown RBP5.38□□□□□ -1.55
SMG1-207ENST00000563235 DNM3Q9UQ16 869 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 CUL7Q14999 1698 aa5.38□□□□□ -1.55
SMG1-207ENST00000563235 ANKRD18BA2A2Z9 1011 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 TRIM75PA6NK02 468 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 DDX3YO15523 660 aaKnown RBP5.37□□□□□ -1.55
SMG1-207ENST00000563235 SLC7A4O43246 635 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 USP17L7P0C7H9 530 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 HSPA6P17066 643 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 L1CAMP32004 1257 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 MCM4P33991 863 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 IFIT5Q13325 482 aaKnown RBP5.37□□□□□ -1.55
SMG1-207ENST00000563235 ANKDD1AQ495B1 522 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 PKN3Q6P5Z2 889 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 GALNTL5Q7Z4T8 443 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 SLC9B2Q86UD5 537 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 COLGALT2Q8IYK4 626 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 GJD3Q8N144 294 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 SLC16A10Q8TF71 515 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 MAML1Q92585 1016 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 CNDP2Q96KP4 475 aaKnown RBP5.37□□□□□ -1.55
SMG1-207ENST00000563235 RABEP2Q9H5N1 569 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 PCDHGB6Q9Y5F9 930 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 PCDHGA11Q9Y5H2 935 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 PARP3Q9Y6F1 533 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 SLC30A1Q9Y6M5 507 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 TTC37Q6PGP7 1564 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 F8VZ95 297 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 KIF2AO00139 706 aaPredicted RBP5.37□□□□□ -1.55
SMG1-207ENST00000563235 PPEF1O14829 653 aaPredicted RBP5.37□□□□□ -1.55
SMG1-207ENST00000563235 DKC1O60832 514 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMG1-207ENST00000563235 CENPAP49450 140 aa5.37□□□□□ -1.55
SMG1-207ENST00000563235 SP140Q13342 867 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms