RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 LOC102724159A0A0B4J2E5 919 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 MOXD2PA6NHM9 499 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 DCDC2CA8MYV0 355 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 RPS6KB1P23443 525 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 GRIN2CQ14957 1233 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 PWP2Q15269 919 aaKnown RBP19.19■□□□□ 0.66
CDT1-202ENST00000562747 APOA5Q6Q788 366 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 ARMCX2Q7L311 632 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 HOMER1Q86YM7 354 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 MCF2L2Q86YR7 1114 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 CCDC144CPQ8IYA2 1237 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 FBXL16Q8N461 479 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 USP38Q8NB14 1042 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 FANCBQ8NB91 859 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 PIGSQ96S52 555 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 ABHD16BQ9H3Z7 469 aa19.19■□□□□ 0.66
CDT1-202ENST00000562747 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.19■□□□□ 0.66
CDT1-202ENST00000562747 LCTP09848 1927 aa19.18■□□□□ 0.66
CDT1-202ENST00000562747 PNMA6FA0A0J9YX94 578 aa19.18■□□□□ 0.66
CDT1-202ENST00000562747 DUSP11O75319 330 aaKnown RBP19.18■□□□□ 0.66
CDT1-202ENST00000562747 RXRAP19793 462 aa19.18■□□□□ 0.66
CDT1-202ENST00000562747 CASTP20810 708 aaKnown RBP19.18■□□□□ 0.66
CDT1-202ENST00000562747 DNAJB2P25686 324 aa19.18■□□□□ 0.66
CDT1-202ENST00000562747 CST5P28325 142 aaPredicted RBP19.18■□□□□ 0.66
CDT1-202ENST00000562747 RCAN1P53805 252 aa19.18■□□□□ 0.66
CDT1-202ENST00000562747 RPS6P62753 249 aaKnown RBP19.18■□□□□ 0.66
CDT1-202ENST00000562747 FGD1P98174 961 aa19.18■□□□□ 0.66
CDT1-202ENST00000562747 SLC30A10Q6XR72 485 aa19.18■□□□□ 0.66
CDT1-202ENST00000562747 MICU3Q86XE3 530 aa19.18■□□□□ 0.66
CDT1-202ENST00000562747 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.18■□□□□ 0.665e-8■■■■□ 19.4
CDT1-202ENST00000562747 ASTN1O14525 1302 aa19.18■□□□□ 0.66
CDT1-202ENST00000562747 CTAGE5O15320 804 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 PPP1R11O60927 126 aaPredicted RBP19.17■□□□□ 0.66
CDT1-202ENST00000562747 TIMP1P01033 207 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 C6orf222P0C671 652 aaPredicted RBP19.17■□□□□ 0.66
CDT1-202ENST00000562747 CPA1P15085 419 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 CALML3P27482 149 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 CDK7P50613 346 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 ACVR2BQ13705 512 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 Q6ZUG5 572 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 C16orf59Q7L2K0 433 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 DNERQ8NFT8 737 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 TM6SF1Q9BZW5 370 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 KATNBL1Q9H079 304 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 UPF3AQ9H1J1 476 aaKnown RBP19.17■□□□□ 0.66
CDT1-202ENST00000562747 ZSWIM6Q9HCJ5 1215 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 RBM28Q9NW13 759 aaKnown RBP19.17■□□□□ 0.66
CDT1-202ENST00000562747 BRPF3Q9ULD4 1205 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 PCDHA1Q9Y5I3 950 aa19.17■□□□□ 0.66
CDT1-202ENST00000562747 KLF18A0A0U1RQI7 1052 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 ZBTB43O43298 467 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 PLEKHA8P1O95397 391 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 ASGR1P07306 291 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 ALDH5A1P51649 535 aaPredicted RBP19.16■□□□□ 0.66
CDT1-202ENST00000562747 CCDC144BQ3MJ40 725 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 TMTC3Q6ZXV5 915 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 RUFY3Q7L099 469 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 RAB11FIP4Q86YS3 637 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 SRBD1Q8N5C6 995 aaKnown RBP19.16■□□□□ 0.66
CDT1-202ENST00000562747 SAMD3Q8N6K7 520 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 RRP36Q96EU6 259 aaKnown RBP19.16■□□□□ 0.66
CDT1-202ENST00000562747 PURBQ96QR8 312 aaKnown RBP19.16■□□□□ 0.66
CDT1-202ENST00000562747 MPHOSPH6Q99547 160 aaKnown RBP19.16■□□□□ 0.66
CDT1-202ENST00000562747 AGXT2Q9BYV1 514 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 MAP3K20Q9NYL2 800 aaKnown RBP19.16■□□□□ 0.66
CDT1-202ENST00000562747 GBF1Q92538 1859 aa19.16■□□□□ 0.66
CDT1-202ENST00000562747 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.15■□□□□ 0.66
CDT1-202ENST00000562747 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.15■□□□□ 0.66
CDT1-202ENST00000562747 GJA9P57773 515 aa19.15■□□□□ 0.66
CDT1-202ENST00000562747 GHRHRQ02643 423 aa19.15■□□□□ 0.66
CDT1-202ENST00000562747 MFSD5Q6N075 450 aa19.15■□□□□ 0.66
CDT1-202ENST00000562747 GLT1D1Q96MS3 346 aa19.15■□□□□ 0.66
CDT1-202ENST00000562747 SEC63Q9UGP8 760 aaKnown RBP19.15■□□□□ 0.66
CDT1-202ENST00000562747 ELP1O95163 1332 aa19.15■□□□□ 0.66
CDT1-202ENST00000562747 BAZ2BQ9UIF8 2168 aaKnown RBP19.15■□□□□ 0.66
CDT1-202ENST00000562747 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.14■□□□□ 0.65
CDT1-202ENST00000562747 GRXCR1A8MXD5 290 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 B4DLN1 442 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 CSF2RAP15509 400 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 PTGS1P23219 599 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 PBX2P40425 430 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 MRPL12P52815 198 aaKnown RBP19.14■□□□□ 0.65
CDT1-202ENST00000562747 ANAPC15P60006 121 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 PPP2R5BQ15173 497 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 RTN1Q16799 776 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 TMEM240Q5SV17 173 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 RASIP1Q5U651 963 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 TBC1D5Q92609 795 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 BRF1Q92994 677 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 PPP1R12CQ9BZL4 782 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 ZNF576Q9H609 170 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 CYP46A1Q9Y6A2 500 aa19.14■□□□□ 0.65
CDT1-202ENST00000562747 DDX49Q9Y6V7 483 aaKnown RBP19.14■□□□□ 0.65
CDT1-202ENST00000562747 A0A0U1RQG5 324 aaPredicted RBP19.13■□□□□ 0.65
CDT1-202ENST00000562747 GOLGA8AA7E2F4 631 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 GOLGA8BA8MQT2 603 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 OPLAHO14841 1288 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 HSD17B4P51659 736 aa19.13■□□□□ 0.65
CDT1-202ENST00000562747 BEX3Q00994 111 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms