RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 A6NJR5 290 aa19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 NKRFO15226 690 aaKnown RBP eCLIP19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 NT5C2P49902 561 aa19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 RAB30Q15771 203 aa19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 IQCA1Q86XH1 822 aa19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 ADGRF4Q8IZF3 695 aa19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 YTHDC1Q96MU7 727 aaKnown RBP19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 ZSCAN10Q96SZ4 725 aaPredicted RBP19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 NKX2-4Q9H2Z4 354 aa19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 KAT14Q9H8E8 782 aa19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 COL20A1Q9P218 1284 aa19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 MSRAQ9UJ68 235 aa19.55■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 RAD50Q92878 1312 aa19.54■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 SUPT20HL2P0C7V6 817 aa19.54■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 TXNP10599 105 aaKnown RBP19.54■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 NBPF20Q3BBV1 942 aa19.54■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 RPUSD2Q8IZ73 545 aaKnown RBP19.54■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 DSCC1Q9BVC3 393 aa19.54■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 IL25Q9H293 177 aa19.54■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 GPHNQ9NQX3 736 aaPredicted RBP19.54■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 ZSWIM5Q9P217 1185 aa19.54■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 ABCB11O95342 1321 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 SCN5AQ14524 2016 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 HIP1O00291 1037 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 RABGGTBP53611 331 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 ADGRE1Q14246 886 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 ASPRV1Q53RT3 343 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 BRDTQ58F21 947 aaPredicted RBP19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 CCDC178Q5BJE1 867 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 FAM47CQ5HY64 1035 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 SYTL5Q8TDW5 730 aaPredicted RBP19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 TAAR1Q96RJ0 339 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 GAS2L1Q99501 681 aaPredicted RBP19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 PRDM6Q9NQX0 595 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 TANC1Q9C0D5 1861 aa19.53■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 B4DLN1 442 aa19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 MRPL12P52815 198 aaKnown RBP19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 TTLL4Q14679 1199 aa19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 IMMTQ16891 758 aaKnown RBP19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 QRICH1Q2TAL8 776 aa19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 NFRKBQ6P4R8 1299 aa19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 CCDC62Q6P9F0 684 aa19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 MAF1Q9H063 256 aa19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 SLC28A3Q9HAS3 691 aa19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 SLC4A7Q9Y6M7 1214 aa19.52■□□□□ 0.72
VPS9D1-AS1-201ENST00000562298 KPNA6O60684 536 aa19.51■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 MYOGP15173 224 aa19.51■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 DEFB128Q7Z7B8 93 aa19.51■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PPM1EQ8WY54 764 aa19.51■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 JMJD4Q9H9V9 463 aa19.51■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 ZBBXA8MT70 800 aa19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PFKMP08237 780 aa19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PARP1P09874 1014 aaKnown RBP19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 LY6KQ17RY6 165 aa19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 SEPT14Q6ZU15 432 aa19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 NSUN6Q8TEA1 469 aaKnown RBP19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 KRT23Q9C075 422 aa19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 CTNNA3Q9UI47 895 aa19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 MYH6P13533 1939 aa19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 KIAA1217Q5T5P2 1943 aa19.5■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PITPNM1O00562 1244 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 OPLAHO14841 1288 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 DHX16O60231 1041 aaKnown RBP19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 MMP3P08254 477 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 ATP2A2P16615 1042 aaKnown RBP19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PTPN11Q06124 597 aaPredicted RBP19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 ARHGAP1Q07960 439 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 FBXO11Q86XK2 927 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 MCF2L2Q86YR7 1114 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 STAG2Q8N3U4 1231 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 AFG1LQ8WV93 481 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 RMDN3Q96TC7 470 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 CNNM2Q9H8M5 875 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 VAT1LQ9HCJ6 419 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PCDHA11Q9Y5I1 949 aa19.49■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 IQCF3P0C7M6 154 aa19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 RFC2P35250 354 aa19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 SEC23AQ15436 765 aa19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 TJAP1Q5JTD0 557 aa19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 IFIT1BQ5T764 474 aaKnown RBP19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PPP2R2DQ66LE6 453 aa19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 CYB5R4Q7L1T6 521 aa19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 SYMPKQ92797 1274 aaKnown RBP19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 CTAGE1Q96RT6 745 aa19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 IWS1Q96ST2 819 aa19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 UBAC1Q9BSL1 405 aa19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 MRPL11Q9Y3B7 192 aaKnown RBP19.48■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PPP1R11O60927 126 aaPredicted RBP19.47■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 GH1P01241 217 aa19.47■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 GSPT1P15170 499 aaKnown RBP19.47■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 EIF2AK2P19525 551 aaKnown RBP19.47■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 IGFBP4P22692 258 aa19.47■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 PDE4AP27815 886 aa19.47■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 CHMP4BP1P59074 171 aa19.47■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 STXBP2Q15833 593 aa19.47■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 KAT2BQ92831 832 aa19.47■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 CFBP00751 764 aa19.46■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 HSD17B4P51659 736 aa19.46■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 CCDC85BQ15834 202 aaPredicted RBP19.46■□□□□ 0.71
VPS9D1-AS1-201ENST00000562298 ARHGEF16Q5VV41 709 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms