RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 PIBF1Q8WXW3 757 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 TAAR1Q96RJ0 339 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 LLPHQ9BRT6 129 aaKnown RBP15.46■□□□□ 0.07
CDH1-204ENST00000562118 SLC26A6Q9BXS9 759 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 GLT8D2Q9H1C3 349 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 HMX1Q9NP08 348 aaPredicted RBP15.46■□□□□ 0.07
CDH1-204ENST00000562118 VTA1Q9NP79 307 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 PXMP2Q9NR77 195 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 MYH7BA7E2Y1 1941 aa15.46■□□□□ 0.07
CDH1-204ENST00000562118 TNRC18O15417 2968 aaPredicted RBP15.46■□□□□ 0.07
CDH1-204ENST00000562118 DNAH12Q6ZR08 3092 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 M0R2N6 131 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 MSCO60682 206 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 SSRP1Q08945 709 aaKnown RBP15.45■□□□□ 0.06
CDH1-204ENST00000562118 TAPT1Q6NXT6 567 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 UBE2Q1Q7Z7E8 422 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 TRIM22Q8IYM9 498 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 NECAB1Q8N987 351 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 CRYGNQ8WXF5 182 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 PDCD2LQ9BRP1 358 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 PSTPIP2Q9H939 334 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 OGDHLQ9ULD0 1010 aa15.45■□□□□ 0.06
CDH1-204ENST00000562118 CPLX1O14810 134 aa15.44■□□□□ 0.06
CDH1-204ENST00000562118 SGPL1O95470 568 aa15.44■□□□□ 0.06
CDH1-204ENST00000562118 HOXA13P31271 388 aaPredicted RBP15.44■□□□□ 0.06
CDH1-204ENST00000562118 MNX1P50219 401 aaPredicted RBP15.44■□□□□ 0.06
CDH1-204ENST00000562118 NAPAP54920 295 aa15.44■□□□□ 0.06
CDH1-204ENST00000562118 ACVR2BQ13705 512 aa15.44■□□□□ 0.06
CDH1-204ENST00000562118 USP17L6PQ6QN14 398 aa15.44■□□□□ 0.06
CDH1-204ENST00000562118 DAGLBQ8NCG7 672 aa15.44■□□□□ 0.06
CDH1-204ENST00000562118 CUL5Q93034 780 aa15.44■□□□□ 0.06
CDH1-204ENST00000562118 RMDN3Q96TC7 470 aa15.44■□□□□ 0.06
CDH1-204ENST00000562118 RNF208Q9H0X6 261 aa15.44■□□□□ 0.06
CDH1-204ENST00000562118 DDX20Q9UHI6 824 aaKnown RBP15.44■□□□□ 0.06
CDH1-204ENST00000562118 POTEFA5A3E0 1075 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 ADCY6O43306 1168 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 AKR1A1P14550 325 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 RGS19P49795 217 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 AP3B2Q13367 1082 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 PGM5Q15124 567 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 PRAMEF19Q5SWL8 479 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 XRRA1Q6P2D8 792 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 VSIG10LQ86VR7 867 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 U2AF1L4Q8WU68 220 aaKnown RBP15.43■□□□□ 0.06
CDH1-204ENST00000562118 CCDC12Q8WUD4 166 aaPredicted RBP15.43■□□□□ 0.06
CDH1-204ENST00000562118 BIN2Q9UBW5 565 aaPredicted RBP15.43■□□□□ 0.06
CDH1-204ENST00000562118 CNPY2Q9Y2B0 182 aa15.43■□□□□ 0.06
CDH1-204ENST00000562118 DDX49Q9Y6V7 483 aaKnown RBP15.43■□□□□ 0.06
CDH1-204ENST00000562118 SMCO2A6NFE2 343 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 B4DLN1 442 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 ADAMTS3O15072 1205 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 STAM2O75886 525 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 RGS20O76081 388 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 NR3C2P08235 984 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 ADCY7P51828 1080 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 MRPL12P52815 198 aaKnown RBP15.42■□□□□ 0.06
CDH1-204ENST00000562118 AKAP17AQ02040 695 aaKnown RBP15.42■□□□□ 0.06
CDH1-204ENST00000562118 GALNT17Q6IS24 598 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 ANKLE1Q8NAG6 615 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 CCDC148Q8NFR7 591 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 IL31RAQ8NI17 732 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 TMX3Q96JJ7 454 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 PHF20Q9BVI0 1012 aa15.42■□□□□ 0.06
CDH1-204ENST00000562118 UPF3AQ9H1J1 476 aaKnown RBP15.42■□□□□ 0.06
CDH1-204ENST00000562118 GNEQ9Y223 722 aaKnown RBP15.42■□□□□ 0.06
CDH1-204ENST00000562118 JAK2O60674 1132 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 FOSP01100 380 aaPredicted RBP15.41■□□□□ 0.06
CDH1-204ENST00000562118 GNA11P29992 359 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 MRPS9P82933 396 aaKnown RBP15.41■□□□□ 0.06
CDH1-204ENST00000562118 CUL4AQ13619 759 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 UBE2SQ16763 222 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 CCDC144BQ3MJ40 725 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 ARHGEF16Q5VV41 709 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 PCNX4Q63HM2 1172 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 MCTP2Q6DN12 878 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 CCDC62Q6P9F0 684 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 NOL8Q76FK4 1167 aaKnown RBP15.41■□□□□ 0.06
CDH1-204ENST00000562118 AIFM3Q96NN9 605 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 INPP4AQ96PE3 977 aaPredicted RBP15.41■□□□□ 0.06
CDH1-204ENST00000562118 MPHOSPH6Q99547 160 aaKnown RBP15.41■□□□□ 0.06
CDH1-204ENST00000562118 VPS54Q9P1Q0 977 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 Q9Y3F1 56 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 ALPK3Q96L96 1907 aa15.41■□□□□ 0.06
CDH1-204ENST00000562118 CTAGE5O15320 804 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 PPFIA3O75145 1194 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 ADAMTS4O75173 837 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 DUSP11O75319 330 aaKnown RBP15.4■□□□□ 0.06
CDH1-204ENST00000562118 EIF3JO75822 258 aaKnown RBP15.4■□□□□ 0.06
CDH1-204ENST00000562118 EIF2AK2P19525 551 aaKnown RBP15.4■□□□□ 0.06
CDH1-204ENST00000562118 CST5P28325 142 aaPredicted RBP15.4■□□□□ 0.06
CDH1-204ENST00000562118 SREBF1P36956 1147 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 STXBP2Q15833 593 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 IQSEC1Q6DN90 963 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 CCDC83Q8IWF9 413 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 FBXO16Q8IX29 292 aaPredicted RBP15.4■□□□□ 0.06
CDH1-204ENST00000562118 WASF1Q92558 559 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 SNX21Q969T3 373 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 DEFB118Q96PH6 123 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 TMEM106CQ9BVX2 250 aa15.4■□□□□ 0.06
CDH1-204ENST00000562118 ORC3Q9UBD5 711 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms