RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 P2RX5Q93086 422 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 ZIM3Q96PE6 472 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 CCSER1Q9C0I3 900 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 EHD4Q9H223 541 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 GDF3Q9NR23 364 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 KBTBD4Q9NVX7 518 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 MAPK8IP1Q9UQF2 711 aa20.69■□□□□ 0.9
BBS4-204ENST00000562084 ABCB11O95342 1321 aa20.68■□□□□ 0.9
BBS4-204ENST00000562084 HMGB1P1B2RPK0 211 aaPredicted RBP20.68■□□□□ 0.9
BBS4-204ENST00000562084 CHUKO15111 745 aa20.68■□□□□ 0.9
BBS4-204ENST00000562084 SCG2P13521 617 aa20.68■□□□□ 0.9
BBS4-204ENST00000562084 HMGB2P26583 209 aaKnown RBP20.68■□□□□ 0.9
BBS4-204ENST00000562084 MCM7P33993 719 aa20.68■□□□□ 0.9
BBS4-204ENST00000562084 PMS1P54277 932 aaKnown RBP20.68■□□□□ 0.9
BBS4-204ENST00000562084 PIK3AP1Q6ZUJ8 805 aa20.68■□□□□ 0.9
BBS4-204ENST00000562084 EIF1ADQ8N9N8 165 aaKnown RBP20.68■□□□□ 0.9
BBS4-204ENST00000562084 HDAC7Q8WUI4 952 aa20.68■□□□□ 0.9
BBS4-204ENST00000562084 PCMTD1Q96MG8 357 aaPredicted RBP20.68■□□□□ 0.9
BBS4-204ENST00000562084 DUSP9Q99956 384 aaKnown RBP20.68■□□□□ 0.9
BBS4-204ENST00000562084 SH3GLB2Q9NR46 395 aa20.68■□□□□ 0.9
BBS4-204ENST00000562084 LAD1O00515 517 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 FGRP09769 529 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 LSP1P33241 339 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 PDCLQ13371 301 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 CFAP221Q4G0U5 840 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.67■□□□□ 0.9
BBS4-204ENST00000562084 SMIM5Q71RC9 77 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 AMIGO3Q86WK7 504 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 ARFGAP2Q8N6H7 521 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 WHAMMQ8TF30 809 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 CNOT6LQ96LI5 555 aaKnown RBP20.67■□□□□ 0.9
BBS4-204ENST00000562084 SAMM50Q9Y512 469 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 DUSP10Q9Y6W6 482 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 GRID2IPA4D2P6 1211 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 GNPATO15228 680 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 PPP1R37O75864 691 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 MTIF2P46199 727 aaKnown RBP20.67■□□□□ 0.9
BBS4-204ENST00000562084 SMTNP53814 917 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 PFKFB3Q16875 520 aaPredicted RBP20.67■□□□□ 0.9
BBS4-204ENST00000562084 DTHD1Q6ZMT9 781 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 NOC4LQ9BVI4 516 aaKnown RBP20.67■□□□□ 0.9
BBS4-204ENST00000562084 EDEM3Q9BZQ6 932 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 ACTR5Q9H9F9 607 aaPredicted RBP20.67■□□□□ 0.9
BBS4-204ENST00000562084 CAPN6Q9Y6Q1 641 aa20.67■□□□□ 0.9
BBS4-204ENST00000562084 TMCO5BA8MYB1 307 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 ZNF263O14978 683 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 RPS6KA4O75676 772 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 GPTP24298 496 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 KIF11P52732 1056 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 CYP27A1Q02318 531 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 NAALADL2Q58DX5 795 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 NAA35Q5VZE5 725 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 PPP4R3AQ6IN85 833 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 VCPKMTQ9H867 229 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 DONSONQ9NYP3 566 aa20.66■□□□□ 0.9
BBS4-204ENST00000562084 C21orf2O43822 256 aa20.65■□□□□ 0.9
BBS4-204ENST00000562084 RDXP35241 583 aaKnown RBP20.65■□□□□ 0.9
BBS4-204ENST00000562084 PTGISQ16647 500 aa20.65■□□□□ 0.9
BBS4-204ENST00000562084 CCDC84Q86UT8 332 aaPredicted RBP20.65■□□□□ 0.9
BBS4-204ENST00000562084 NR1D1P20393 614 aa20.64■□□□□ 0.9
BBS4-204ENST00000562084 PRPHP41219 470 aa20.64■□□□□ 0.9
BBS4-204ENST00000562084 ACTN3Q08043 901 aaPredicted RBP20.64■□□□□ 0.9
BBS4-204ENST00000562084 SLC15A2Q16348 729 aa20.64■□□□□ 0.9
BBS4-204ENST00000562084 MIIPQ5JXC2 388 aa20.64■□□□□ 0.9
BBS4-204ENST00000562084 CCDC50Q8IVM0 306 aa20.64■□□□□ 0.9
BBS4-204ENST00000562084 ZNF473Q8WTR7 871 aaKnown RBP20.64■□□□□ 0.9
BBS4-204ENST00000562084 NOX5Q96PH1 765 aa20.64■□□□□ 0.9
BBS4-204ENST00000562084 BRIP1Q9BX63 1249 aa20.64■□□□□ 0.9
BBS4-204ENST00000562084 STK32BQ9NY57 414 aa20.64■□□□□ 0.9
BBS4-204ENST00000562084 MINDY4BA8MYZ0 360 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 MOCS3O95396 460 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 FGFR1OPO95684 399 aaKnown RBP20.64■□□□□ 0.89
BBS4-204ENST00000562084 FAM107AO95990 144 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 IL6STP40189 918 aaPredicted RBP20.64■□□□□ 0.89
BBS4-204ENST00000562084 UBA7P41226 1012 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 LRIG3Q6UXM1 1119 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 TAX1BP1Q86VP1 789 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 RASSF8Q8NHQ8 419 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 ATP6V1G3Q96LB4 118 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 AK8Q96MA6 479 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 LUC7LQ9NQ29 371 aaKnown RBP20.64■□□□□ 0.89
BBS4-204ENST00000562084 TFCP2L1Q9NZI6 479 aa20.64■□□□□ 0.89
BBS4-204ENST00000562084 RTCBQ9Y3I0 505 aaKnown RBP20.64■□□□□ 0.89
BBS4-204ENST00000562084 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
BBS4-204ENST00000562084 MDH1P40925 334 aaKnown RBP20.63■□□□□ 0.89
BBS4-204ENST00000562084 SLC7A5Q01650 507 aa20.63■□□□□ 0.89
BBS4-204ENST00000562084 NFRKBQ6P4R8 1299 aa20.63■□□□□ 0.89
BBS4-204ENST00000562084 BLIDQ8IZY5 108 aa20.63■□□□□ 0.89
BBS4-204ENST00000562084 RNPC3Q96LT9 517 aaKnown RBP20.63■□□□□ 0.89
BBS4-204ENST00000562084 CCDC43Q96MW1 224 aaKnown RBP20.63■□□□□ 0.89
BBS4-204ENST00000562084 LRP2BPQ9P2M1 347 aa20.63■□□□□ 0.89
BBS4-204ENST00000562084 MAGEB6P1A0A0J9YX57 407 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 GOLGA6L7A0A1B0GV03 622 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 SSU72P8A0A1W2PR75 194 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 AKR1B10O60218 316 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 NT5C2P49902 561 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 NEDD9Q14511 834 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 GALNT17Q6IS24 598 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 NLRP14Q86W24 1093 aa20.62■□□□□ 0.89
BBS4-204ENST00000562084 MLXIPQ9HAP2 919 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms