RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 DNM1LO00429 736 aa14.76□□□□□ -0.05
CLK3-206ENST00000562078 FMNL1O95466 1100 aaPredicted RBP14.76□□□□□ -0.05
CLK3-206ENST00000562078 IFNAR1P17181 557 aa14.76□□□□□ -0.05
CLK3-206ENST00000562078 ATP2B4P23634 1241 aa14.76□□□□□ -0.05
CLK3-206ENST00000562078 CDC25CP30307 473 aa14.76□□□□□ -0.05
CLK3-206ENST00000562078 FXR1P51114 621 aaKnown RBP eCLIP14.76□□□□□ -0.05
CLK3-206ENST00000562078 RPS6KA3P51812 740 aa14.76□□□□□ -0.05
CLK3-206ENST00000562078 MRPS25P82663 173 aaKnown RBP14.76□□□□□ -0.05
CLK3-206ENST00000562078 EVX2Q03828 476 aa14.76□□□□□ -0.05
CLK3-206ENST00000562078 FKBP15Q5T1M5 1219 aa14.76□□□□□ -0.05
CLK3-206ENST00000562078 CMTR1Q8N1G2 835 aaKnown RBP14.76□□□□□ -0.05
CLK3-206ENST00000562078 CCDC82Q8N4S0 544 aa14.76□□□□□ -0.05
CLK3-206ENST00000562078 RSRC1Q96IZ7 334 aaKnown RBP14.76□□□□□ -0.05
CLK3-206ENST00000562078 NUCKS1Q9H1E3 243 aaKnown RBP14.76□□□□□ -0.05
CLK3-206ENST00000562078 TMX4Q9H1E5 349 aaPredicted RBP14.76□□□□□ -0.05
CLK3-206ENST00000562078 MYO1AQ9UBC5 1043 aa14.76□□□□□ -0.05
CLK3-206ENST00000562078 OPA1O60313 960 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 IPO7O95373 1038 aaKnown RBP14.75□□□□□ -0.05
CLK3-206ENST00000562078 CCDC50Q8IVM0 306 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 RASSF8Q8NHQ8 419 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 MYCBPAPQ8TBZ2 947 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 SLC39A2Q9NP94 309 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 TFR2Q9UP52 801 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 USP17L12C9JPN9 530 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 USP17L21D6R901 530 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 C6orf229H3BNL8 230 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 ZNF185O15231 689 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 GUCY1A2P33402 732 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 C2orf54Q08AI8 447 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 PSMD2Q13200 908 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 SEC23AQ15436 765 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 THEMIS2Q5TEJ8 643 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 C6orf89Q6UWU4 347 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 ZNF804AQ7Z570 1209 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 NLRP14Q86W24 1093 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 DZIP1Q86YF9 867 aaKnown RBP14.75□□□□□ -0.05
CLK3-206ENST00000562078 SP8Q8IXZ3 490 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 HDAC7Q8WUI4 952 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 MTA3Q9BTC8 594 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 MAN1B1Q9UKM7 699 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 ATP6V0A2Q9Y487 856 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 SAR1BQ9Y6B6 198 aa14.75□□□□□ -0.05
CLK3-206ENST00000562078 GOLGA6L7A0A1B0GV03 622 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 PDE2AO00408 941 aaPredicted RBP14.74□□□□□ -0.05
CLK3-206ENST00000562078 KRT14P02533 472 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 GYPCP04921 128 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 EPB41P11171 864 aaKnown RBP14.74□□□□□ -0.05
CLK3-206ENST00000562078 PECAM1P16284 738 aaPredicted RBP14.74□□□□□ -0.05
CLK3-206ENST00000562078 SLC8A1P32418 973 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 PPARDQ03181 441 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 NNTQ13423 1086 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 PTGISQ16647 500 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 CCDC121Q6ZUS5 278 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 TMTC2Q8N394 836 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 ENAHQ8N8S7 591 aaPredicted RBP14.74□□□□□ -0.05
CLK3-206ENST00000562078 SLC16A10Q8TF71 515 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 CRNKL1Q9BZJ0 848 aaKnown RBP14.74□□□□□ -0.05
CLK3-206ENST00000562078 LTBP1Q14766 1721 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 CHRNA5P30532 468 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 TRAF1Q13077 416 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 SLC39A14Q15043 492 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 APTXQ7Z2E3 356 aaKnown RBP14.74□□□□□ -0.05
CLK3-206ENST00000562078 TRIM22Q8IYM9 498 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 ENOX1Q8TC92 643 aaKnown RBP14.74□□□□□ -0.05
CLK3-206ENST00000562078 NSMCE1Q8WV22 266 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 RUFY1Q96T51 708 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 OSBPL7Q9BZF2 842 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 DCP1AQ9NPI6 582 aaPredicted RBP14.74□□□□□ -0.05
CLK3-206ENST00000562078 RPS6KL1Q9Y6S9 549 aa14.74□□□□□ -0.05
CLK3-206ENST00000562078 A6NNZ2 444 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 RAB27AP51159 221 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 TUBB8Q3ZCM7 444 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 FANCBQ8NB91 859 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 OR8K1Q8NGG5 319 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 TBC1D16Q8TBP0 767 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 CAGE1Q8TC20 777 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 STAMBPL1Q96FJ0 436 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 RNF225M0QZC1 329 aaPredicted RBP14.73□□□□□ -0.05
CLK3-206ENST00000562078 ATP2C2O75185 946 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 PPP1R37O75864 691 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 MYO1EQ12965 1108 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 SLC4A8Q2Y0W8 1093 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 BZW1Q7L1Q6 419 aaKnown RBP14.73□□□□□ -0.05
CLK3-206ENST00000562078 WASF1Q92558 559 aa14.73□□□□□ -0.05
CLK3-206ENST00000562078 ZSCAN10Q96SZ4 725 aaPredicted RBP14.73□□□□□ -0.05
CLK3-206ENST00000562078 SLX4Q8IY92 1834 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 CYP2D6P10635 497 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 CDC25AP30304 524 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 DRP2Q13474 957 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 SPECC1Q5M775 1068 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 CAPRIN2Q6IMN6 1127 aaKnown RBP14.72□□□□□ -0.05
CLK3-206ENST00000562078 STYK1Q6J9G0 422 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 C3orf20Q8ND61 904 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 FAM210AQ96ND0 272 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 POLLQ9UGP5 575 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 KCNJ14Q9UNX9 436 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 TTC36A6NLP5 189 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 E7EVH7 732 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 PSMD14O00487 310 aa14.72□□□□□ -0.05
CLK3-206ENST00000562078 ZBTB7AO95365 584 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms