RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 RUFY2Q8WXA3 655 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 PIBF1Q8WXW3 757 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 TBC1D5Q92609 795 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 COPS5Q92905 334 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 WDR11Q9BZH6 1224 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 MTMR10Q9NXD2 777 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 TAF6LQ9Y6J9 622 aa9.63□□□□□ -0.87
GINS3-204ENST00000561952 MYH7BA7E2Y1 1941 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 UMODL1Q5DID0 1318 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 GBF1Q92538 1859 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 IFIT3O14879 490 aaKnown RBP9.62□□□□□ -0.87
GINS3-204ENST00000561952 ZEB2O60315 1214 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 TIMP1P01033 207 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 CYP21A2P08686 494 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 CYP2C18P33260 490 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 ITGA7Q13683 1181 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 PPP2R5BQ15173 497 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 FAM47CQ5HY64 1035 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 IQSEC1Q6DN90 963 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 SEPT14Q6ZU15 432 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 RALYLQ86SE5 291 aaKnown RBP9.62□□□□□ -0.87
GINS3-204ENST00000561952 FBXO11Q86XK2 927 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 FAM126BQ8IXS8 530 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 SLC17A8Q8NDX2 589 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 MARVELD3Q96A59 401 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 TOX2Q96NM4 488 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
GINS3-204ENST00000561952 JMJD4Q9H9V9 463 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 SENP2Q9HC62 589 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 COL20A1Q9P218 1284 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 TBX21Q9UL17 535 aa9.62□□□□□ -0.87
GINS3-204ENST00000561952 SCN5AQ14524 2016 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 ABCB11O95342 1321 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 ERICH2A1L162 156 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 E7EWF7 191 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 SORBS3O60504 671 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 B4GALT4O60513 344 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 ARIH2O95376 493 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 CFBP00751 764 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 CSF2RAP15509 400 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 EIF2AK2P19525 551 aaKnown RBP9.61□□□□□ -0.87
GINS3-204ENST00000561952 CDK7P50613 346 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 CCL23P55773 120 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 SEC23AQ15436 765 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 DUSP28Q4G0W2 176 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 GPR153Q6NV75 609 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 STOX1Q6ZVD7 989 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 SYTL5Q8TDW5 730 aaPredicted RBP9.61□□□□□ -0.87
GINS3-204ENST00000561952 MORC4Q8TE76 937 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 ANKS1AQ92625 1134 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 GUCD1Q96NT3 240 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 TAAR1Q96RJ0 339 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.61□□□□□ -0.87
GINS3-204ENST00000561952 TRPV6Q9H1D0 765 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
GINS3-204ENST00000561952 PNMA2Q9UL42 364 aa9.61□□□□□ -0.87
GINS3-204ENST00000561952 GRIN2DO15399 1336 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 PRUNE2Q8WUY3 3088 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 DOCK5Q9H7D0 1870 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 KLRF2D3W0D1 207 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 SGSM2O43147 1006 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 CABYRO75952 493 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 TXNP10599 105 aaKnown RBP9.6□□□□□ -0.87
GINS3-204ENST00000561952 CPT1AP50416 773 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 PPIGQ13427 754 aaKnown RBP eCLIP9.6□□□□□ -0.87
GINS3-204ENST00000561952 WTAPQ15007 396 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 ARHGEF16Q5VV41 709 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 FAM109BQ6ICB4 259 aaPredicted RBP9.6□□□□□ -0.87
GINS3-204ENST00000561952 MFSD5Q6N075 450 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 TMEM199Q8N511 208 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 DNERQ8NFT8 737 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 NCOA7Q8NI08 942 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 SCFD2Q8WU76 684 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 RMDN3Q96TC7 470 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 MYL10Q9BUA6 226 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 HIPK3Q9H422 1215 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 TRMT13Q9NUP7 481 aaKnown RBP9.6□□□□□ -0.87
GINS3-204ENST00000561952 MAD2L2Q9UI95 211 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 STXBP5LQ9Y2K9 1186 aa9.6□□□□□ -0.87
GINS3-204ENST00000561952 MRPL11Q9Y3B7 192 aaKnown RBP9.6□□□□□ -0.87
GINS3-204ENST00000561952 RBM8AQ9Y5S9 174 aaKnown RBP9.6□□□□□ -0.87
GINS3-204ENST00000561952 SCN10AQ9Y5Y9 1956 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 GRXCR1A8MXD5 290 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 B4DLN1 442 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 PPP1R11O60927 126 aaPredicted RBP9.59□□□□□ -0.87
GINS3-204ENST00000561952 CD4P01730 458 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 CYP2C9P11712 490 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 MYCLP12524 364 aaPredicted RBP9.59□□□□□ -0.87
GINS3-204ENST00000561952 EDNRBP24530 442 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 HOXA13P31271 388 aaPredicted RBP9.59□□□□□ -0.87
GINS3-204ENST00000561952 NT5C2P49902 561 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 MRPL12P52815 198 aaKnown RBP9.59□□□□□ -0.87
GINS3-204ENST00000561952 PURAQ00577 322 aaKnown RBP9.59□□□□□ -0.87
GINS3-204ENST00000561952 TTLL4Q14679 1199 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 LY6KQ17RY6 165 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 TMEM67Q5HYA8 995 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 MCF2L2Q86YR7 1114 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 RAB11FIP4Q86YS3 637 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 MYLIPQ8WY64 445 aa9.59□□□□□ -0.87
GINS3-204ENST00000561952 SCLYQ96I15 445 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms