RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 SEC62Q99442 399 aaKnown RBP21.58■■□□□ 1.05
COMMD4-204ENST00000561662 ZBTB40Q9NUA8 1239 aa21.58■■□□□ 1.05
COMMD4-204ENST00000561662 IL9P15248 144 aa21.57■■□□□ 1.04
COMMD4-204ENST00000561662 PDE4BQ07343 736 aa21.57■■□□□ 1.04
COMMD4-204ENST00000561662 TTBK2Q6IQ55 1244 aa21.57■■□□□ 1.04
COMMD4-204ENST00000561662 NFRKBQ6P4R8 1299 aa21.57■■□□□ 1.04
COMMD4-204ENST00000561662 SLC30A10Q6XR72 485 aa21.57■■□□□ 1.04
COMMD4-204ENST00000561662 LRRCC1Q9C099 1032 aa21.57■■□□□ 1.04
COMMD4-204ENST00000561662 SUGCTQ9HAC7 445 aa21.57■■□□□ 1.04
COMMD4-204ENST00000561662 WDFY4Q6ZS81 3184 aa21.57■■□□□ 1.04
COMMD4-204ENST00000561662 TRIP12Q14669 1992 aaPredicted RBP21.56■■□□□ 1.04
COMMD4-204ENST00000561662 PRR33A8MZF0 331 aa21.56■■□□□ 1.04
COMMD4-204ENST00000561662 PATL2C9JE40 543 aaKnown RBP21.56■■□□□ 1.04
COMMD4-204ENST00000561662 BAIAP3O94812 1187 aa21.56■■□□□ 1.04
COMMD4-204ENST00000561662 ICAM1P05362 532 aa21.56■■□□□ 1.04
COMMD4-204ENST00000561662 MRE11P49959 708 aa21.56■■□□□ 1.04
COMMD4-204ENST00000561662 GPNMBQ14956 572 aa21.56■■□□□ 1.04
COMMD4-204ENST00000561662 PPP2R5BQ15173 497 aa21.56■■□□□ 1.04
COMMD4-204ENST00000561662 PTGISQ16647 500 aa21.56■■□□□ 1.04
COMMD4-204ENST00000561662 FAM178BQ8IXR5 827 aa21.56■■□□□ 1.04
COMMD4-204ENST00000561662 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.56■■□□□ 1.04
COMMD4-204ENST00000561662 ECHDC1Q9NTX5 307 aa21.56■■□□□ 1.04
COMMD4-204ENST00000561662 ADD3Q9UEY8 706 aaKnown RBP21.56■■□□□ 1.04
COMMD4-204ENST00000561662 RBM47A0AV96 593 aaKnown RBP21.55■■□□□ 1.04
COMMD4-204ENST00000561662 PLA2G6O60733 806 aa21.55■■□□□ 1.04
COMMD4-204ENST00000561662 GNAT2P19087 354 aa21.55■■□□□ 1.04
COMMD4-204ENST00000561662 PPARAQ07869 468 aa21.55■■□□□ 1.04
COMMD4-204ENST00000561662 PDE4DQ08499 809 aa21.55■■□□□ 1.04
COMMD4-204ENST00000561662 BRDTQ58F21 947 aaPredicted RBP21.55■■□□□ 1.04
COMMD4-204ENST00000561662 IL17RBQ9NRM6 502 aa21.55■■□□□ 1.04
COMMD4-204ENST00000561662 CTDSPL2Q05D32 466 aa21.54■■□□□ 1.04
COMMD4-204ENST00000561662 CTAGE1Q96RT6 745 aa21.54■■□□□ 1.04
COMMD4-204ENST00000561662 RAD50Q92878 1312 aa21.54■■□□□ 1.04
COMMD4-204ENST00000561662 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-204ENST00000561662 LINC01553A4QN01 128 aa21.53■■□□□ 1.04
COMMD4-204ENST00000561662 A6NJR5 290 aa21.53■■□□□ 1.04
COMMD4-204ENST00000561662 TSPY2A6NKD2 308 aa21.53■■□□□ 1.04
COMMD4-204ENST00000561662 AAMPQ13685 434 aa21.53■■□□□ 1.04
COMMD4-204ENST00000561662 LEXMQ3ZCV2 418 aa21.53■■□□□ 1.04
COMMD4-204ENST00000561662 PTCRAQ6ISU1 281 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-204ENST00000561662 GDF6Q6KF10 455 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-204ENST00000561662 TGS1Q96RS0 853 aaKnown RBP21.53■■□□□ 1.04
COMMD4-204ENST00000561662 NAPBQ9H115 298 aa21.53■■□□□ 1.04
COMMD4-204ENST00000561662 RANBP17Q9H2T7 1088 aaKnown RBP21.53■■□□□ 1.04
COMMD4-204ENST00000561662 FRMPD2Q68DX3 1309 aaPredicted RBP21.53■■□□□ 1.04
COMMD4-204ENST00000561662 ARIH2O95376 493 aa21.52■■□□□ 1.04
COMMD4-204ENST00000561662 SLC3A2P08195 630 aaKnown RBP21.52■■□□□ 1.04
COMMD4-204ENST00000561662 TXNP10599 105 aaKnown RBP21.52■■□□□ 1.04
COMMD4-204ENST00000561662 CSPP1Q1MSJ5 1256 aa21.52■■□□□ 1.04
COMMD4-204ENST00000561662 DHX38Q92620 1227 aaKnown RBP21.52■■□□□ 1.04
COMMD4-204ENST00000561662 NACAP1Q9BZK3 213 aa21.52■■□□□ 1.04
COMMD4-204ENST00000561662 GPCPD1Q9NPB8 672 aa21.52■■□□□ 1.04
COMMD4-204ENST00000561662 LMCD1Q9NZU5 365 aa21.52■■□□□ 1.04
COMMD4-204ENST00000561662 H3BQ06 376 aaPredicted RBP21.51■■□□□ 1.03
COMMD4-204ENST00000561662 NBNO60934 754 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 GJB5O95377 273 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 SELPP16109 830 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 ERVK-21P61565 698 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 PTPN11Q06124 597 aaPredicted RBP21.51■■□□□ 1.03
COMMD4-204ENST00000561662 SYDE2Q5VT97 1194 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 RNF207Q6ZRF8 634 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 LRRC8DQ7L1W4 858 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 AFAP1L1Q8TED9 768 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 SCFD2Q8WU76 684 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 CLEC4DQ8WXI8 215 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 ANKS1AQ92625 1134 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 RAD9AQ99638 391 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 C17orf80Q9BSJ5 609 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 CHMP4BQ9H444 224 aaKnown RBP21.51■■□□□ 1.03
COMMD4-204ENST00000561662 GTF3C3Q9Y5Q9 886 aa21.51■■□□□ 1.03
COMMD4-204ENST00000561662 KPNA6O60684 536 aa21.5■■□□□ 1.03
COMMD4-204ENST00000561662 LRRFIP1Q32MZ4 808 aaKnown RBP21.5■■□□□ 1.03
COMMD4-204ENST00000561662 CNKSR3Q6P9H4 555 aa21.5■■□□□ 1.03
COMMD4-204ENST00000561662 CHST3Q7LGC8 479 aa21.5■■□□□ 1.03
COMMD4-204ENST00000561662 CCDC155Q8N6L0 562 aa21.5■■□□□ 1.03
COMMD4-204ENST00000561662 CAGE1Q8TC20 777 aa21.5■■□□□ 1.03
COMMD4-204ENST00000561662 AFG1LQ8WV93 481 aa21.5■■□□□ 1.03
COMMD4-204ENST00000561662 NKRFO15226 690 aaKnown RBP eCLIP21.49■■□□□ 1.03
COMMD4-204ENST00000561662 RANBP6O60518 1105 aaKnown RBP21.49■■□□□ 1.03
COMMD4-204ENST00000561662 RPS6P62753 249 aaKnown RBP21.49■■□□□ 1.03
COMMD4-204ENST00000561662 NHLH1Q02575 133 aa21.49■■□□□ 1.03
COMMD4-204ENST00000561662 EP400NLQ6ZTU2 488 aa21.49■■□□□ 1.03
COMMD4-204ENST00000561662 FBXL18Q96ME1 805 aa21.49■■□□□ 1.03
COMMD4-204ENST00000561662 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.49■■□□□ 1.03
COMMD4-204ENST00000561662 ZFYP08048 801 aaPredicted RBP21.48■■□□□ 1.03
COMMD4-204ENST00000561662 CKBP12277 381 aa21.48■■□□□ 1.03
COMMD4-204ENST00000561662 ALADP13716 330 aa21.48■■□□□ 1.03
COMMD4-204ENST00000561662 FBXO22Q8NEZ5 403 aa21.48■■□□□ 1.03
COMMD4-204ENST00000561662 DCAF4Q8WV16 495 aa21.48■■□□□ 1.03
COMMD4-204ENST00000561662 PCDHB15Q9Y5E8 787 aa21.48■■□□□ 1.03
COMMD4-204ENST00000561662 GRXCR2A6NFK2 248 aa21.47■■□□□ 1.03
COMMD4-204ENST00000561662 LY6KQ17RY6 165 aa21.47■■□□□ 1.03
COMMD4-204ENST00000561662 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.47■■□□□ 1.03
COMMD4-204ENST00000561662 SEPT14Q6ZU15 432 aa21.47■■□□□ 1.03
COMMD4-204ENST00000561662 KAT2BQ92831 832 aa21.47■■□□□ 1.03
COMMD4-204ENST00000561662 SIP14410 1827 aa21.46■■□□□ 1.03
COMMD4-204ENST00000561662 CXCL10P02778 98 aa21.46■■□□□ 1.03
COMMD4-204ENST00000561662 MMP3P08254 477 aa21.46■■□□□ 1.03
COMMD4-204ENST00000561662 EDNRBP24530 442 aa21.46■■□□□ 1.03
COMMD4-204ENST00000561662 PPP4R3BQ5MIZ7 849 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms