RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 WDR11Q9BZH6 1224 aa17.94■□□□□ 0.46
CCDC113-203ENST00000561517 AP5M1Q9H0R1 490 aa17.94■□□□□ 0.46
CCDC113-203ENST00000561517 SLC12A7Q9Y666 1083 aa17.94■□□□□ 0.46
CCDC113-203ENST00000561517 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
CCDC113-203ENST00000561517 HMGB1P09429 215 aaKnown RBP17.93■□□□□ 0.46
CCDC113-203ENST00000561517 BEX3Q00994 111 aa17.93■□□□□ 0.46
CCDC113-203ENST00000561517 TLE2Q04725 743 aa17.93■□□□□ 0.46
CCDC113-203ENST00000561517 FSCN1Q16658 493 aaKnown RBP17.93■□□□□ 0.46
CCDC113-203ENST00000561517 SRBD1Q8N5C6 995 aaKnown RBP17.93■□□□□ 0.46
CCDC113-203ENST00000561517 SCFD2Q8WU76 684 aa17.93■□□□□ 0.46
CCDC113-203ENST00000561517 GLT1D1Q96MS3 346 aa17.93■□□□□ 0.46
CCDC113-203ENST00000561517 SCN10AQ9Y5Y9 1956 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 NKRFO15226 690 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCDC113-203ENST00000561517 PLEKHA8P1O95397 391 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 RXRAP19793 462 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 APOA5Q6Q788 366 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 ANKRD33Q7Z3H0 272 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 FANCBQ8NB91 859 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 RRP36Q96EU6 259 aaKnown RBP17.92■□□□□ 0.46
CCDC113-203ENST00000561517 TCEANC2Q96MN5 208 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 TOX2Q96NM4 488 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 PDLIM7Q9NR12 457 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 PXMP2Q9NR77 195 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 SNX14Q9Y5W7 946 aa17.92■□□□□ 0.46
CCDC113-203ENST00000561517 ZEB2O60315 1214 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 CABYRO75952 493 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 NR3C2P08235 984 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 CDK7P50613 346 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 FXR1P51114 621 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC113-203ENST00000561517 PPP2R5BQ15173 497 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 STXBP2Q15833 593 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 ARHGEF16Q5VV41 709 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 TMTC3Q6ZXV5 915 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 PIBF1Q8WXW3 757 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 PCDH10Q9P2E7 1040 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 PRKAG2Q9UGJ0 569 aa17.91■□□□□ 0.46
CCDC113-203ENST00000561517 A0A0U1RQG5 324 aaPredicted RBP17.9■□□□□ 0.46
CCDC113-203ENST00000561517 GCOM1H8Y6P7 765 aaPredicted RBP17.9■□□□□ 0.46
CCDC113-203ENST00000561517 SLC34A2O95436 690 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 POLR2MP0CAP2 368 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 EIF2AK2P19525 551 aaKnown RBP17.9■□□□□ 0.46
CCDC113-203ENST00000561517 HOXA13P31271 388 aaPredicted RBP17.9■□□□□ 0.46
CCDC113-203ENST00000561517 TTLL4Q14679 1199 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 CCDC62Q6P9F0 684 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 SYNE3Q6ZMZ3 975 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 SH3RF1Q7Z6J0 888 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 MICU3Q86XE3 530 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 RAB11FIP4Q86YS3 637 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 PDCD2LQ9BRP1 358 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 SEC63Q9UGP8 760 aaKnown RBP17.9■□□□□ 0.46
CCDC113-203ENST00000561517 BRPF3Q9ULD4 1205 aa17.9■□□□□ 0.46
CCDC113-203ENST00000561517 TRIM43BA6NCK2 446 aa17.89■□□□□ 0.45
CCDC113-203ENST00000561517 ARVCFO00192 962 aa17.89■□□□□ 0.45
CCDC113-203ENST00000561517 PQBP1O60828 265 aaKnown RBP17.89■□□□□ 0.45
CCDC113-203ENST00000561517 EIF3JO75822 258 aaKnown RBP17.89■□□□□ 0.45
CCDC113-203ENST00000561517 ARIH2O95376 493 aa17.89■□□□□ 0.45
CCDC113-203ENST00000561517 CLTBP09497 229 aa17.89■□□□□ 0.45
CCDC113-203ENST00000561517 TXNP10599 105 aaKnown RBP17.89■□□□□ 0.45
CCDC113-203ENST00000561517 MDM2Q00987 491 aaPredicted RBP17.89■□□□□ 0.45
CCDC113-203ENST00000561517 CXCL17Q6UXB2 119 aa17.89■□□□□ 0.45
CCDC113-203ENST00000561517 CMTR1Q8N1G2 835 aaKnown RBP17.89■□□□□ 0.45
CCDC113-203ENST00000561517 SLC43A3Q8NBI5 491 aa17.89■□□□□ 0.45
CCDC113-203ENST00000561517 VTI1AQ96AJ9 217 aa17.89■□□□□ 0.45
CCDC113-203ENST00000561517 TRIM43Q96BQ3 446 aaPredicted RBP17.89■□□□□ 0.45
CCDC113-203ENST00000561517 JAKMIP1Q96N16 626 aaKnown RBP17.89■□□□□ 0.45
CCDC113-203ENST00000561517 RBM28Q9NW13 759 aaKnown RBP17.89■□□□□ 0.45
CCDC113-203ENST00000561517 MROH7Q68CQ1 1323 aa17.89■□□□□ 0.45
CCDC113-203ENST00000561517 DCDC2CA8MYV0 355 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 KIAA0355O15063 1070 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 ZBTB43O43298 467 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 CPA1P15085 419 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 RCAN1P53805 252 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 FAAP100Q0VG06 881 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 PGM5Q15124 567 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 SEPT14Q6ZU15 432 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 FBXL16Q8N461 479 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 OR6J1Q8NGC5 347 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 COPS5Q92905 334 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 LBHD1Q9BQE6 289 aaPredicted RBP17.88■□□□□ 0.45
CCDC113-203ENST00000561517 SEZ6LQ9BYH1 1024 aa17.88■□□□□ 0.45
CCDC113-203ENST00000561517 UBE2OQ9C0C9 1292 aaKnown RBP17.88■□□□□ 0.45
CCDC113-203ENST00000561517 PRDM5Q9NQX1 630 aaPredicted RBP17.88■□□□□ 0.45
CCDC113-203ENST00000561517 A6NJR5 290 aa17.87■□□□□ 0.45
CCDC113-203ENST00000561517 CPT1AP50416 773 aa17.87■□□□□ 0.45
CCDC113-203ENST00000561517 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
CCDC113-203ENST00000561517 VSIG10LQ86VR7 867 aa17.87■□□□□ 0.45
CCDC113-203ENST00000561517 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
CCDC113-203ENST00000561517 AGXT2Q9BYV1 514 aa17.87■□□□□ 0.45
CCDC113-203ENST00000561517 POLR3EQ9NVU0 708 aa17.87■□□□□ 0.45
CCDC113-203ENST00000561517 GRIN2DO15399 1336 aa17.87■□□□□ 0.45
CCDC113-203ENST00000561517 FRMPD4Q14CM0 1322 aa17.87■□□□□ 0.45
CCDC113-203ENST00000561517 KLF18A0A0U1RQI7 1052 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 PIK3CDO00329 1044 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 RGS20O76081 388 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 RPS6KB1P23443 525 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 PSMA5P28066 241 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 PURAQ00577 322 aaKnown RBP17.86■□□□□ 0.45
CCDC113-203ENST00000561517 FUT2Q10981 343 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 RTN1Q16799 776 aa17.86■□□□□ 0.45
CCDC113-203ENST00000561517 FCHSD1Q86WN1 690 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms