RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 SMC5Q8IY18 1101 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 SCFD2Q8WU76 684 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 MTG1Q9BT17 334 aaPredicted RBP9.87□□□□□ -0.83
PALB2-202ENST00000561514 NKX2-4Q9H2Z4 354 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 OSBPL3Q9H4L5 887 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 TRMT13Q9NUP7 481 aaKnown RBP9.87□□□□□ -0.83
PALB2-202ENST00000561514 THEGQ9P2T0 379 aa9.87□□□□□ -0.83
PALB2-202ENST00000561514 NEDD4P46934 1319 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 FRMPD2Q68DX3 1309 aaPredicted RBP9.86□□□□□ -0.83
PALB2-202ENST00000561514 RAD50Q92878 1312 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 PTPDC1A2A3K4 754 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 TRANK1O15050 2925 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 TTLL4Q14679 1199 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 PPP2R5BQ15173 497 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 RNF207Q6ZRF8 634 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 OR6J1Q8NGC5 347 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 CHMP4CQ96CF2 233 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 SCLYQ96I15 445 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 ASB2Q96Q27 587 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 CTAGE1Q96RT6 745 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 RNF41Q9H4P4 317 aaPredicted RBP9.86□□□□□ -0.83
PALB2-202ENST00000561514 SLC28A3Q9HAS3 691 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 GPCPD1Q9NPB8 672 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 SLC4A7Q9Y6M7 1214 aa9.86□□□□□ -0.83
PALB2-202ENST00000561514 TNFRSF10AO00220 468 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 ARIH2O95376 493 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 CYP2C9P11712 490 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 HOXD8P13378 290 aaPredicted RBP9.85□□□□□ -0.83
PALB2-202ENST00000561514 ATP2A2P16615 1042 aaKnown RBP9.85□□□□□ -0.83
PALB2-202ENST00000561514 CALML3P27482 149 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 MFAP1P55081 439 aaKnown RBP9.85□□□□□ -0.83
PALB2-202ENST00000561514 PDE4DQ08499 809 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 NBPF20Q3BBV1 942 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 BRDTQ58F21 947 aaPredicted RBP9.85□□□□□ -0.83
PALB2-202ENST00000561514 RRP12Q5JTH9 1297 aaKnown RBP9.85□□□□□ -0.83
PALB2-202ENST00000561514 MFSD6Q6ZSS7 791 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 PHOSPHO2Q8TCD6 241 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 ESR2Q92731 530 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 EMID1Q96A84 441 aaPredicted RBP9.85□□□□□ -0.83
PALB2-202ENST00000561514 CRBNQ96SW2 442 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 SLC9A7Q96T83 725 aa9.85□□□□□ -0.83
PALB2-202ENST00000561514 MPHOSPH6Q99547 160 aaKnown RBP9.85□□□□□ -0.83
PALB2-202ENST00000561514 ABCB11O95342 1321 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 B4DLN1 442 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 BAIAP3O94812 1187 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 MYL3P08590 195 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 IQCF3P0C7M6 154 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 MRPL12P52815 198 aaKnown RBP9.84□□□□□ -0.83
PALB2-202ENST00000561514 RABGGTBP53611 331 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 HAND2P61296 217 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 MRPS5P82675 430 aaKnown RBP9.84□□□□□ -0.83
PALB2-202ENST00000561514 CCDC178Q5BJE1 867 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 PPP2R2DQ66LE6 453 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 CAGE1Q8TC20 777 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 SYTL5Q8TDW5 730 aaPredicted RBP9.84□□□□□ -0.83
PALB2-202ENST00000561514 KAT2BQ92831 832 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 TOMM22Q9NS69 142 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 COL20A1Q9P218 1284 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
PALB2-202ENST00000561514 MTMR7Q9Y216 660 aa9.84□□□□□ -0.83
PALB2-202ENST00000561514 CXCL10P02778 98 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 MMP3P08254 477 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 TXNP10599 105 aaKnown RBP9.83□□□□□ -0.84
PALB2-202ENST00000561514 ACTN1P12814 892 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 MYOGP15173 224 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 SDSP20132 328 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 ARHGAP1Q07960 439 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 BFSP2Q13515 415 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 GPNMBQ14956 572 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 CDC37Q16543 378 aaPredicted RBP9.83□□□□□ -0.84
PALB2-202ENST00000561514 ASPRV1Q53RT3 343 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 PNMA1Q8ND90 353 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 COPS5Q92905 334 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 MTMR8Q96EF0 704 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 IWS1Q96ST2 819 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 DSCC1Q9BVC3 393 aa9.83□□□□□ -0.84
PALB2-202ENST00000561514 GPHNQ9NQX3 736 aaPredicted RBP9.83□□□□□ -0.84
PALB2-202ENST00000561514 XIRP2A4UGR9 3374 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 EPOPA6NHQ4 379 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 ZBBXA8MT70 800 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 HAS3O00219 553 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 OPLAHO14841 1288 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 ARHGEF15O94989 841 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 PARNO95453 639 aaKnown RBP9.82□□□□□ -0.84
PALB2-202ENST00000561514 F2P00734 622 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 GH1P01241 217 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 CA3P07451 260 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 HSD17B4P51659 736 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 TAP1Q03518 808 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 QRICH1Q2TAL8 776 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 TMEM67Q5HYA8 995 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 IQCA1Q86XH1 822 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 MCF2L2Q86YR7 1114 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 HERC6Q8IVU3 1022 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 ADGRF4Q8IZF3 695 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 ENAHQ8N8S7 591 aaPredicted RBP9.82□□□□□ -0.84
PALB2-202ENST00000561514 ADAMTS19Q8TE59 1207 aa9.82□□□□□ -0.84
PALB2-202ENST00000561514 NSUN6Q8TEA1 469 aaKnown RBP9.82□□□□□ -0.84
PALB2-202ENST00000561514 AFAP1L1Q8TED9 768 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms