RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 CEP112Q8N8E3 955 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 SNX29Q8TEQ0 813 aa16.31■□□□□ 0.2
CRTC3-210ENST00000560927 CLK2P49760 499 aaKnown RBP16.3■□□□□ 0.2
CRTC3-210ENST00000560927 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 CENPPQ6IPU0 288 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 TMC4Q7Z404 712 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 ZSCAN29Q8IWY8 852 aaPredicted RBP16.3■□□□□ 0.2
CRTC3-210ENST00000560927 GLIS3Q8NEA6 775 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 CDK5RAP3Q96JB5 506 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 KCNQ5Q9NR82 932 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 MYO1AQ9UBC5 1043 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 STK17AQ9UEE5 414 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 SWAP70Q9UH65 585 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 PCDHAC2Q9Y5I4 1007 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 AMPD2Q01433 879 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 TSR1Q2NL82 804 aaKnown RBP16.3■□□□□ 0.2
CRTC3-210ENST00000560927 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 UNC13DQ70J99 1090 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 FAM114A1Q8IWE2 563 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 RAD54LQ92698 747 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 HAS1Q92839 578 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
CRTC3-210ENST00000560927 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
CRTC3-210ENST00000560927 GOLGB1Q14789 3259 aaKnown RBP16.3■□□□□ 0.2
CRTC3-210ENST00000560927 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 CACNB3P54284 484 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 PDIA5Q14554 519 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 PNKPQ96T60 521 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 DNAJC18Q9H819 358 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 ARFGAP3Q9NP61 516 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 IDEP14735 1019 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 PPP1R2P41236 205 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 QSER1Q2KHR3 1735 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 ZNF771Q7L3S4 317 aaPredicted RBP16.29■□□□□ 0.2
CRTC3-210ENST00000560927 DDX12PQ92771 950 aa16.29■□□□□ 0.2
CRTC3-210ENST00000560927 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
CRTC3-210ENST00000560927 PVALEFA0A1B0GWK0 134 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 RCCD1A6NED2 376 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 ENC1O14682 589 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 ERCC3P19447 782 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 ZBED6P86452 979 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 TMEM119Q4V9L6 283 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 KRT79Q5XKE5 535 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 NCAPH2Q6IBW4 605 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 PPP4R3AQ6IN85 833 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 ERGIC2Q96RQ1 377 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 NUP58Q9BVL2 599 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 HAUS4Q9H6D7 363 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 NHEJ1Q9H9Q4 299 aaPredicted RBP16.28■□□□□ 0.2
CRTC3-210ENST00000560927 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 ZBTB5O15062 677 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 TUBB2AQ13885 445 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 LRRC41Q15345 812 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 CCDC122Q5T0U0 273 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 PPP1R18Q6NYC8 613 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 RETREG2Q8NC44 543 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 CUL5Q93034 780 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 TEKT1Q969V4 418 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 TUBB2BQ9BVA1 445 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 FUT8Q9BYC5 575 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 RAB34Q9BZG1 259 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 LACRTQ9GZZ8 138 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 MYO6Q9UM54 1294 aa16.28■□□□□ 0.2
CRTC3-210ENST00000560927 MYO3BQ8WXR4 1341 aa16.27■□□□□ 0.2
CRTC3-210ENST00000560927 EPHB6O15197 1021 aa16.27■□□□□ 0.2
CRTC3-210ENST00000560927 RAD21O60216 631 aa16.27■□□□□ 0.2
CRTC3-210ENST00000560927 GPATCH4Q5T3I0 446 aaKnown RBP16.27■□□□□ 0.2
CRTC3-210ENST00000560927 PSTPIP2Q9H939 334 aa16.27■□□□□ 0.2
CRTC3-210ENST00000560927 CCDC151A5D8V7 595 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L15C9J2P7 530 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L13C9JLJ4 530 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L11C9JVI0 530 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L18D6R9N7 530 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L22D6RA61 530 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L17D6RBQ6 530 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L19D6RCP7 530 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L20D6RJB6 530 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 ATP8B1O43520 1251 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 HLA-DOAP06340 250 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 RHOXF2BP0C7M4 288 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 NPR1P16066 1061 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 EHHADHQ08426 723 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L24Q0WX57 530 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 TCP10Q12799 353 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 WHAMMP3Q1A5X7 153 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 LONRF2Q1L5Z9 754 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 USP17L6PQ6QN14 398 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 HHIPL2Q6UWX4 724 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 NOA1Q8NC60 698 aaKnown RBP16.27■□□□□ 0.19
CRTC3-210ENST00000560927 MTMR8Q96EF0 704 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 RHOXF2Q9BQY4 288 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 UBXN6Q9BZV1 441 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 QTRT2Q9H974 415 aaKnown RBP16.27■□□□□ 0.19
CRTC3-210ENST00000560927 DBNDD1Q9H9R9 158 aa16.27■□□□□ 0.19
CRTC3-210ENST00000560927 PSMD14O00487 310 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 PLEKP08567 350 aaPredicted RBP16.26■□□□□ 0.19
CRTC3-210ENST00000560927 CRKP46108 304 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 CYP27A1Q02318 531 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 VWA3BQ502W6 1294 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms