RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 DCHS1Q96JQ0 3298 aa11.43□□□□□ -0.58
HERC1-210ENST00000560897 PNMA6EA0A0J9YXQ4 647 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
HERC1-210ENST00000560897 PDE6AP16499 860 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 LTBRP36941 435 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 NBL1P41271 181 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 NDUFV1P49821 464 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 IKQ13123 557 aaPredicted RBP11.42□□□□□ -0.58
HERC1-210ENST00000560897 PPP2R5BQ15173 497 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 TMEM63BQ5T3F8 832 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 FBXO11Q86XK2 927 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 TMEM192Q8IY95 271 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 ADSSL1Q8N142 457 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 LCORLQ8N3X6 602 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 PPP2R3CQ969Q6 453 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 TRERF1Q96PN7 1200 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 IGFLR1Q9H665 355 aa11.42□□□□□ -0.58
HERC1-210ENST00000560897 ADD3Q9UEY8 706 aaKnown RBP11.42□□□□□ -0.58
HERC1-210ENST00000560897 DDX49Q9Y6V7 483 aaKnown RBP11.42□□□□□ -0.58
HERC1-210ENST00000560897 ZNF532Q9HCE3 1301 aa11.41□□□□□ -0.58
HERC1-210ENST00000560897 MYH4Q9Y623 1939 aa11.41□□□□□ -0.58
HERC1-210ENST00000560897 NKRFO15226 690 aaKnown RBP eCLIP11.41□□□□□ -0.58
HERC1-210ENST00000560897 NBNO60934 754 aa11.41□□□□□ -0.58
HERC1-210ENST00000560897 ALAS1P13196 640 aa11.41□□□□□ -0.58
HERC1-210ENST00000560897 C12orf60Q5U649 245 aa11.41□□□□□ -0.58
HERC1-210ENST00000560897 ZBTB33Q86T24 672 aa11.41□□□□□ -0.58
HERC1-210ENST00000560897 SP7Q8TDD2 431 aaPredicted RBP11.41□□□□□ -0.58
HERC1-210ENST00000560897 MPHOSPH6Q99547 160 aaKnown RBP11.41□□□□□ -0.58
HERC1-210ENST00000560897 LMAN2LQ9H0V9 348 aa11.41□□□□□ -0.58
HERC1-210ENST00000560897 TLR7Q9NYK1 1049 aaKnown RBP11.41□□□□□ -0.58
HERC1-210ENST00000560897 RALGAPA2Q2PPJ7 1873 aa11.4□□□□□ -0.58
HERC1-210ENST00000560897 CYP2D7A0A087X1C5 515 aa11.4□□□□□ -0.58
HERC1-210ENST00000560897 MED19A0JLT2 244 aaPredicted RBP11.4□□□□□ -0.58
HERC1-210ENST00000560897 SURF6O75683 361 aaKnown RBP11.4□□□□□ -0.58
HERC1-210ENST00000560897 CKBP12277 381 aa11.4□□□□□ -0.58
HERC1-210ENST00000560897 CTNNB1P35222 781 aa11.4□□□□□ -0.58
HERC1-210ENST00000560897 HTRA4P83105 476 aaPredicted RBP11.4□□□□□ -0.58
HERC1-210ENST00000560897 DLX2Q07687 328 aaPredicted RBP11.4□□□□□ -0.58
HERC1-210ENST00000560897 CTC1Q2NKJ3 1217 aa11.4□□□□□ -0.58
HERC1-210ENST00000560897 NSMFQ6X4W1 530 aa11.4□□□□□ -0.58
HERC1-210ENST00000560897 C11orf84Q9BUA3 381 aaPredicted RBP11.4□□□□□ -0.58
HERC1-210ENST00000560897 ARMT1Q9H993 441 aa11.4□□□□□ -0.58
HERC1-210ENST00000560897 ALG13Q9NP73 1137 aaKnown RBP11.4□□□□□ -0.58
HERC1-210ENST00000560897 NYAP2Q9P242 653 aa11.4□□□□□ -0.58
HERC1-210ENST00000560897 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 TPRP12270 2363 aaKnown RBP11.39□□□□□ -0.59
HERC1-210ENST00000560897 LOC730098B7Z3J9 87 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 TBX10O75333 385 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 LGR5O75473 907 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 CSPG5O95196 566 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 STAT2P52630 851 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 HYAL1Q12794 435 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 GPNMBQ14956 572 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 GDF6Q6KF10 455 aaPredicted RBP11.39□□□□□ -0.59
HERC1-210ENST00000560897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.39□□□□□ -0.59
HERC1-210ENST00000560897 FRMD5Q7Z6J6 570 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 LRRC47Q8N1G4 583 aaKnown RBP11.39□□□□□ -0.59
HERC1-210ENST00000560897 MKNK2Q9HBH9 465 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 CYP39A1Q9NYL5 469 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 CLIP2Q9UDT6 1046 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 RWDD3Q9Y3V2 267 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 GVINP1Q7Z2Y8 2422 aa11.39□□□□□ -0.59
HERC1-210ENST00000560897 EPG5Q9HCE0 2579 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 A6NJR5 290 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 UPP2O95045 317 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 MBD4O95243 580 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 BMP3P12645 472 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 PDE4BQ07343 736 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 RBL2Q08999 1139 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 FAM160B2Q86V87 743 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 RPAP2Q8IXW5 612 aaPredicted RBP11.38□□□□□ -0.59
HERC1-210ENST00000560897 C7orf31Q8N865 590 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 MORC4Q8TE76 937 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 SCFD2Q8WU76 684 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 CHURC1Q8WUH1 139 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 ASIC4Q96FT7 647 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 RPGRIP1Q96KN7 1286 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 INCENPQ9NQS7 918 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 GREB1LQ9C091 1923 aaPredicted RBP11.38□□□□□ -0.59
HERC1-210ENST00000560897 DMDP11532 3685 aa11.38□□□□□ -0.59
HERC1-210ENST00000560897 LOC102724159A0A0B4J2E5 919 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 TMEM232C9JQI7 657 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 PRKAB2O43741 272 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 RGS20O76081 388 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 EYA4O95677 639 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 RB1P06400 928 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 ALDH5A1P51649 535 aaPredicted RBP11.37□□□□□ -0.59
HERC1-210ENST00000560897 PDE4DQ08499 809 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 CBX2Q14781 532 aaPredicted RBP11.37□□□□□ -0.59
HERC1-210ENST00000560897 PWP2Q15269 919 aaKnown RBP11.37□□□□□ -0.59
HERC1-210ENST00000560897 TCTN1Q2MV58 587 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 SLFN13Q68D06 897 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 SESTD1Q86VW0 696 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 FIBCD1Q8N539 461 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 RIPOR3Q96MK2 946 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 CNTNAP3BQ96NU0 1288 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 DNAJC2Q99543 621 aaKnown RBP11.37□□□□□ -0.59
HERC1-210ENST00000560897 PHF7Q9BWX1 381 aaPredicted RBP11.37□□□□□ -0.59
HERC1-210ENST00000560897 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
HERC1-210ENST00000560897 ARPP21Q9UBL0 812 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms