RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 ADCY4Q8NFM4 1077 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 UBXN4Q92575 508 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 MKL1Q969V6 931 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 MCMBPQ9BTE3 642 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 ERVK13-1Q9NX77 482 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 AKT3Q9Y243 479 aa6.91□□□□□ -1.3
PSMA4-221ENST00000560842 GPR55Q9Y2T6 319 aaPredicted RBP6.91□□□□□ -1.3
PSMA4-221ENST00000560842 A0A1W2PQ45 241 aaPredicted RBP6.9□□□□□ -1.3
PSMA4-221ENST00000560842 A0A1W2PQY0 241 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 AURKAO14965 403 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 FGF10O15520 208 aaPredicted RBP6.9□□□□□ -1.3
PSMA4-221ENST00000560842 TNFRSF1AP19438 455 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 ZXDAP98168 799 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 RASGRF1Q13972 1273 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 PPP2R5DQ14738 602 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 RPTNQ6XPR3 784 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 SLCO6A1Q86UG4 719 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 CRACR2BQ8N4Y2 399 aaPredicted RBP6.9□□□□□ -1.3
PSMA4-221ENST00000560842 TMEM52Q8NDY8 209 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 SGSM3Q96HU1 749 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 ZDHHC15Q96MV8 337 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
PSMA4-221ENST00000560842 ITGAVP06756 1048 aa6.89□□□□□ -1.31
PSMA4-221ENST00000560842 PFKLP17858 780 aa6.89□□□□□ -1.31
PSMA4-221ENST00000560842 LIMS1P48059 325 aa6.89□□□□□ -1.31
PSMA4-221ENST00000560842 AMPD2Q01433 879 aa6.89□□□□□ -1.31
PSMA4-221ENST00000560842 VWA3BQ502W6 1294 aa6.89□□□□□ -1.31
PSMA4-221ENST00000560842 FERMT3Q86UX7 667 aa6.89□□□□□ -1.31
PSMA4-221ENST00000560842 ZNF227Q86WZ6 799 aa6.89□□□□□ -1.31
PSMA4-221ENST00000560842 COPS5Q92905 334 aa6.89□□□□□ -1.31
PSMA4-221ENST00000560842 SUGT1Q9Y2Z0 365 aa6.89□□□□□ -1.31
PSMA4-221ENST00000560842 NOP56O00567 594 aaKnown RBP6.88□□□□□ -1.31
PSMA4-221ENST00000560842 U2SURPO15042 1029 aaKnown RBP6.88□□□□□ -1.31
PSMA4-221ENST00000560842 PDPK1O15530 556 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 VAMP4O75379 141 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 CD3EP07766 207 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 IFNGR1P15260 489 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 MAPKAPK2P49137 400 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 ADAM17P78536 824 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 CYP4F3Q08477 520 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 RASA3Q14644 834 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 NR1I3Q14994 352 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 PLEKHN1Q494U1 663 aaPredicted RBP6.88□□□□□ -1.31
PSMA4-221ENST00000560842 SV2CQ496J9 727 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 NT5DC1Q5TFE4 455 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 ZC3H14Q6PJT7 736 aaKnown RBP6.88□□□□□ -1.31
PSMA4-221ENST00000560842 LIPIQ6XZB0 460 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 NUP43Q8NFH3 380 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 CYP26B1Q9NR63 512 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 USP40Q9NVE5 1235 aa6.88□□□□□ -1.31
PSMA4-221ENST00000560842 SCG5P05408 212 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 GSTM1P09488 218 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 EEF1DP3Q658K8 133 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 GTF2IRD2BQ6EKJ0 949 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 CYP2R1Q6VVX0 501 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 GTF2IRD2Q86UP8 949 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 FNIP1Q8TF40 1166 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 CDADC1Q9BWV3 514 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 NKX2-4Q9H2Z4 354 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 BACE2Q9Y5Z0 518 aa6.87□□□□□ -1.31
PSMA4-221ENST00000560842 A0A1W2PQU0 124 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 MATN3O15232 486 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 TBX1O43435 398 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 KCNH1O95259 989 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 MSL3P1P0C860 447 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 ZNF200P98182 395 aaPredicted RBP6.86□□□□□ -1.31
PSMA4-221ENST00000560842 TESK1Q15569 626 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 TARBP2Q15633 366 aaKnown RBP6.86□□□□□ -1.31
PSMA4-221ENST00000560842 ADGRG2Q8IZP9 1017 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 CCDC140Q96MF4 163 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 PTCHD1Q96NR3 888 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 LGR4Q9BXB1 951 aa6.86□□□□□ -1.31
PSMA4-221ENST00000560842 PPP1R1BQ9UD71 204 aaPredicted RBP6.86□□□□□ -1.31
PSMA4-221ENST00000560842 IQCA1LA6NCM1 817 aa6.85□□□□□ -1.31
PSMA4-221ENST00000560842 C2orf71A6NGG8 1288 aa6.85□□□□□ -1.31
PSMA4-221ENST00000560842 PLA2G1BP04054 148 aaKnown RBP6.85□□□□□ -1.31
PSMA4-221ENST00000560842 HOXC12P31275 282 aa6.85□□□□□ -1.31
PSMA4-221ENST00000560842 FOXO4P98177 505 aa6.85□□□□□ -1.31
PSMA4-221ENST00000560842 NLGN2Q8NFZ4 835 aa6.85□□□□□ -1.31
PSMA4-221ENST00000560842 DNAJC2Q99543 621 aaKnown RBP6.85□□□□□ -1.31
PSMA4-221ENST00000560842 IMPACTQ9P2X3 320 aa6.85□□□□□ -1.31
PSMA4-221ENST00000560842 A0A1B0GTL3 188 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 SH3D21A4FU49 640 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 STXBP3O00186 592 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 AGRPO00253 132 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 ITGB3P05106 788 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 FBLN1P23142 703 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 PPP2R2AP63151 447 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 HTRA3P83110 453 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 DPY19L1Q2PZI1 675 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 HLA-DQA1Q5Y7H0 255 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 SAPCD2Q86UD0 394 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 JMYQ8N9B5 988 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 KREMEN2Q8NCW0 462 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 NPLOC4Q8TAT6 608 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 BTN2A2Q8WVV5 523 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 DEPDC7Q96QD5 511 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 OSBPL2Q9H1P3 480 aa6.84□□□□□ -1.31
PSMA4-221ENST00000560842 SNTG2Q9NY99 539 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms