RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 COL20A1Q9P218 1284 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 LRRC37A2A6NM11 1700 aa15□□□□□ -0.01
CTDSPL2-209ENST00000560620 hCG_1642624A0A1W2PR95 340 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 ZEB2O60315 1214 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 SMARCA1P28370 1054 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 HSD17B4P51659 736 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 PPP2R5BQ15173 497 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 STXBP2Q15833 593 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 RTN1Q16799 776 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 SEPT14Q6ZU15 432 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 Q6ZUG5 572 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 KLHDC9Q8NEP7 349 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 SCFD2Q8WU76 684 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 UPF3AQ9H1J1 476 aaKnown RBP14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 RBM28Q9NW13 759 aaKnown RBP14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 MAP3K20Q9NYL2 800 aaKnown RBP14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 BRPF3Q9ULD4 1205 aa14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 GNEQ9Y223 722 aaKnown RBP14.99□□□□□ -0.01
CTDSPL2-209ENST00000560620 CEP290O15078 2479 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 GOLGA8AA7E2F4 631 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 GOLGA8BA8MQT2 603 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 OPLAHO14841 1288 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 PQBP1O60828 265 aaKnown RBP14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 TXNP10599 105 aaKnown RBP14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 MYCLP12524 364 aaPredicted RBP14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 PTGS1P23219 599 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 EDNRBP24530 442 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 CST5P28325 142 aaPredicted RBP14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 FSCN1Q16658 493 aaKnown RBP14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 DUSP28Q4G0W2 176 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 TMEM63BQ5T3F8 832 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 TMTC3Q6ZXV5 915 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 SAMD3Q8N6K7 520 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 OR6J1Q8NGC5 347 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 BRF1Q92994 677 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 CUL5Q93034 780 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 IWS1Q96ST2 819 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 LBHD1Q9BQE6 289 aaPredicted RBP14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 PXMP2Q9NR77 195 aa14.98□□□□□ -0.01
CTDSPL2-209ENST00000560620 NR3C2P08235 984 aa14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 RPS6KB1P23443 525 aa14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 APOBRQ0VD83 1088 aa14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 TTLL4Q14679 1199 aa14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 BRDTQ58F21 947 aaPredicted RBP14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 HABP4Q5JVS0 413 aaKnown RBP14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 HEATR3Q7Z4Q2 680 aa14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 SMARCC2Q8TAQ2 1214 aa14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 KCNB2Q92953 911 aa14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 PCDH10Q9P2E7 1040 aa14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 Q9Y3F1 56 aa14.97□□□□□ -0.01
CTDSPL2-209ENST00000560620 EPB41L2O43491 1005 aaKnown RBP14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 CPT1AP50416 773 aa14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 METAP2P50579 478 aaKnown RBP eCLIP14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 MDM2Q00987 491 aaPredicted RBP14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 TLE2Q04725 743 aa14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 CCSAPQ6IQ19 270 aaPredicted RBP14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 CXCL17Q6UXB2 119 aa14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 USP26Q9BXU7 913 aa14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 RBM27Q9P2N5 1060 aaKnown RBP14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 CYP46A1Q9Y6A2 500 aa14.96□□□□□ -0.01
CTDSPL2-209ENST00000560620 ELP1O95163 1332 aa14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 A0A0U1RQG5 324 aaPredicted RBP14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 RBM47A0AV96 593 aaKnown RBP14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 DCDC2CA8MYV0 355 aa14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 NKRFO15226 690 aaKnown RBP eCLIP14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 EIF3JO75822 258 aaKnown RBP14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 MAGEA10P43363 369 aaPredicted RBP14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 SNX17Q15036 470 aa14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 LY6KQ17RY6 165 aa14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 C1orf53Q5VUE5 145 aa14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 RUFY3Q7L099 469 aa14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 COPS5Q92905 334 aa14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 GPKOWQ92917 476 aaPredicted RBP eCLIP14.95□□□□□ -0.022e-7■□□□□ 10.9
CTDSPL2-209ENST00000560620 PSTPIP2Q9H939 334 aa14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 MRVI1Q9Y6F6 885 aa14.95□□□□□ -0.02
CTDSPL2-209ENST00000560620 CCDC196A0A1B0GTZ2 297 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 CTAGE5O15320 804 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 CABYRO75952 493 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 MYL3P08590 195 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 CLTBP09497 229 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 CCND2P30279 289 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 CHMP4BP1P59074 171 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 GHRHRQ02643 423 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 PGM5Q15124 567 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 USP17L6PQ6QN14 398 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 ZFP91Q96JP5 570 aaPredicted RBP14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 PDCD2LQ9BRP1 358 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 UBE2OQ9C0C9 1292 aaKnown RBP14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 TMEM39AQ9NV64 488 aa14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 V9GY48 417 aaPredicted RBP14.94□□□□□ -0.02
CTDSPL2-209ENST00000560620 MROH7Q68CQ1 1323 aa14.93□□□□□ -0.02
CTDSPL2-209ENST00000560620 TLR3O15455 904 aaKnown RBP14.93□□□□□ -0.02
CTDSPL2-209ENST00000560620 ARIH2O95376 493 aa14.93□□□□□ -0.02
CTDSPL2-209ENST00000560620 ADD1P35611 737 aaKnown RBP14.93□□□□□ -0.02
CTDSPL2-209ENST00000560620 NAPAP54920 295 aa14.93□□□□□ -0.02
CTDSPL2-209ENST00000560620 UPF3BQ9BZI7 483 aaKnown RBP14.93□□□□□ -0.02
CTDSPL2-209ENST00000560620 PDLIM7Q9NR12 457 aa14.93□□□□□ -0.02
CTDSPL2-209ENST00000560620 POLR3EQ9NVU0 708 aa14.93□□□□□ -0.02
CTDSPL2-209ENST00000560620 CNTNAP5Q8WYK1 1306 aa14.92□□□□□ -0.02
CTDSPL2-209ENST00000560620 KIAA1217Q5T5P2 1943 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms