RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 MOB2Q70IA6 237 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 TADA2BQ86TJ2 420 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 TAX1BP1Q86VP1 789 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 CCDC50Q8IVM0 306 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 FAM114A1Q8IWE2 563 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 CCDC170Q8IYT3 715 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 MIGA1Q8NAN2 632 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 EIF3CQ99613 913 aaKnown RBP9.55□□□□□ -0.88
CCDC33-209ENST00000560565 ANKZF1Q9H8Y5 726 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 TMOD2Q9NZR1 351 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 RNF14Q9UBS8 474 aa9.55□□□□□ -0.88
CCDC33-209ENST00000560565 ROBO3Q96MS0 1386 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 A0A1W2PQC6 194 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 LRRC10BA6NIK2 292 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 TMCO5BA8MYB1 307 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 FAM155AB1AL88 458 aaPredicted RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 TULP1O00294 542 aaPredicted RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 KIF1CO43896 1103 aaKnown RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 SHOX2O60902 331 aaPredicted RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 NPM3O75607 178 aaKnown RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 MMP1P03956 469 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 FGRP09769 529 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 CALM1P0DP23 149 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 CALM2P0DP24 149 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 CALM3P0DP25 149 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 MARCKSP29966 332 aaPredicted RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 TRAPPC10P48553 1259 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 HAND2P61296 217 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 DYNLL1P63167 89 aaKnown RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 PPARAQ07869 468 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 NNTQ13423 1086 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 DIXDC1Q155Q3 683 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 LONRF3Q496Y0 759 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 GLE1Q53GS7 698 aaKnown RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 NBPF12Q5TAG4 269 aaPredicted RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 CDKAL1Q5VV42 579 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 MCTP2Q6DN12 878 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 APOBEC3HQ6NTF7 200 aaKnown RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 APOA5Q6Q788 366 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 MFSD6Q6ZSS7 791 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 COG1Q8WTW3 980 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 COL25A1Q9BXS0 654 aaPredicted RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 MAGEF1Q9HAY2 307 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 DCP1AQ9NPI6 582 aaPredicted RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 LUC7LQ9NQ29 371 aaKnown RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 MAGEC2Q9UBF1 373 aaPredicted RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 ADD3Q9UEY8 706 aaKnown RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 LIMA1Q9UHB6 759 aaKnown RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 RWDD2AQ9UIY3 292 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 GGA2Q9UJY4 613 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 HPS5Q9UPZ3 1129 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 FAN1Q9Y2M0 1017 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 SAR1BQ9Y6B6 198 aa9.54□□□□□ -0.88
CCDC33-209ENST00000560565 GREB1LQ9C091 1923 aaPredicted RBP9.54□□□□□ -0.88
CCDC33-209ENST00000560565 TRIM75PA6NK02 468 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 PRKAB2O43741 272 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 ORC4O43929 436 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 ZEB2O60315 1214 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 USO1O60763 962 aaKnown RBP9.53□□□□□ -0.88
CCDC33-209ENST00000560565 RNF40O75150 1001 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 ERLIN2O94905 339 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 SLC10A3P09131 477 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 PRLRP16471 622 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 EEF1GP26641 437 aaKnown RBP9.53□□□□□ -0.88
CCDC33-209ENST00000560565 PBX1P40424 430 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 BTDP43251 543 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 CDR1P51861 262 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 CACNB3P54284 484 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 USP14P54578 494 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 DRP2Q13474 957 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 PLCB4Q15147 1175 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 FKBP1CQ5VVH2 108 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 EMBQ6PCB8 327 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 C3orf20Q8ND61 904 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 SDR42E1Q8WUS8 393 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 ZIC5Q96T25 663 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 NBPF3Q9H094 633 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 FAM204AQ9H8W3 233 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 ZNF287Q9HBT7 754 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 ABCB6Q9NP58 842 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 LZTFL1Q9NQ48 299 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 RBM28Q9NW13 759 aaKnown RBP9.53□□□□□ -0.88
CCDC33-209ENST00000560565 FAM184BQ9ULE4 1060 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 DAGLAQ9Y4D2 1042 aa9.53□□□□□ -0.88
CCDC33-209ENST00000560565 SIPA1L1O43166 1804 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 GOLGA6CA6NDK9 693 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 GOLGA6BA6NDN3 693 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 H3BQF6 201 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 N4BP3O15049 544 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 POLR2DO15514 142 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 GOLGA6DP0CG33 693 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 EPB41P11171 864 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 IREB2P48200 963 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 RHBDL3P58872 404 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 PDE4BQ07343 736 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 DGKZQ13574 1117 aa9.52□□□□□ -0.89
CCDC33-209ENST00000560565 KARSQ15046 597 aaKnown RBP9.52□□□□□ -0.89
CCDC33-209ENST00000560565 CCDC178Q5BJE1 867 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms