RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 ZMYM5Q9UJ78 669 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 GPR55Q9Y2T6 319 aaPredicted RBP5.88□□□□□ -1.47
TMOD3-207ENST00000560549 MRVI1Q9Y6F6 885 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 ZFYVE16Q7Z3T8 1539 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 DUOX2Q9NRD8 1548 aa5.88□□□□□ -1.47
TMOD3-207ENST00000560549 PTPRMP28827 1452 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 UNC13BO14795 1591 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 RTEL1-TNFRSF6BF6WH68 1400 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 ERBINQ96RT1 1412 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 MYOCOSA0A1B0GUC4 107 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 NRDCO43847 1150 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 RGL3Q3MIN7 710 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 CEP128Q6ZU80 1094 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 VPS37DQ86XT2 251 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 HAUS7Q99871 368 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 MCMBPQ9BTE3 642 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 LNPKQ9C0E8 428 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 SLC6A17Q9H1V8 727 aa5.87□□□□□ -1.47
TMOD3-207ENST00000560549 YEATS2Q9ULM3 1422 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 NFIBO00712 420 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 PEX10O60683 326 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 SDHBP21912 280 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 KIR2DL1P43626 348 aaPredicted RBP5.86□□□□□ -1.47
TMOD3-207ENST00000560549 KIR2DL2P43627 348 aaPredicted RBP5.86□□□□□ -1.47
TMOD3-207ENST00000560549 HSF5Q4G112 596 aaPredicted RBP5.86□□□□□ -1.47
TMOD3-207ENST00000560549 LCNL1Q6ZST4 164 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 DPH6Q7L8W6 267 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 SLCO6A1Q86UG4 719 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 ANKLE2Q86XL3 938 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 SIAH1Q8IUQ4 282 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 FIBCD1Q8N539 461 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 ZNF513Q8N8E2 541 aaPredicted RBP5.86□□□□□ -1.47
TMOD3-207ENST00000560549 C19orf47Q8N9M1 422 aaKnown RBP5.86□□□□□ -1.47
TMOD3-207ENST00000560549 CRBNQ96SW2 442 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 DSCC1Q9BVC3 393 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 CDADC1Q9BWV3 514 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 KLHL25Q9H0H3 589 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 NOL6Q9H6R4 1146 aaKnown RBP5.86□□□□□ -1.47
TMOD3-207ENST00000560549 SUSD2Q9UGT4 822 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 USP47Q96K76 1375 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 MLH3Q9UHC1 1453 aa5.86□□□□□ -1.47
TMOD3-207ENST00000560549 CNTLNQ9NXG0 1405 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 SSU72P8A0A1W2PR75 194 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 ETV2O00321 342 aaPredicted RBP5.85□□□□□ -1.47
TMOD3-207ENST00000560549 KLF4O43474 513 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 GSNP06396 782 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 EPHX1P07099 455 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 IFNGR1P15260 489 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 NCLP19338 710 aaKnown RBP5.85□□□□□ -1.47
TMOD3-207ENST00000560549 SERINC3Q13530 473 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 AMIGO3Q86WK7 504 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 LRRC56Q8IYG6 542 aaPredicted RBP5.85□□□□□ -1.47
TMOD3-207ENST00000560549 ADCY4Q8NFM4 1077 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 MCOLN1Q9GZU1 580 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 ZNF552Q9H707 407 aaPredicted RBP5.85□□□□□ -1.47
TMOD3-207ENST00000560549 STRIP2Q9ULQ0 834 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 FHOD1Q9Y613 1164 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 A2MP01023 1474 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 RALGAPBQ86X10 1494 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 KIDINS220Q9ULH0 1771 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 IQGAP3Q86VI3 1631 aa5.85□□□□□ -1.47
TMOD3-207ENST00000560549 ST20-MTHFSA0A0A6YYL1 179 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 KIF3BO15066 747 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 CASP7P55210 303 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 RTP1P59025 263 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 PPP2R5EQ16537 467 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 GNPTABQ3T906 1256 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 ANKRD13AQ8IZ07 590 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 SYTL4Q96C24 671 aaPredicted RBP5.84□□□□□ -1.47
TMOD3-207ENST00000560549 FGD4Q96M96 766 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 FCRL3Q96P31 734 aaPredicted RBP5.84□□□□□ -1.47
TMOD3-207ENST00000560549 JMJD8Q96S16 334 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 CARD11Q9BXL7 1154 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 DHX29Q7Z478 1369 aaKnown RBP5.84□□□□□ -1.47
TMOD3-207ENST00000560549 ATP10AO60312 1499 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 DIP2CQ9Y2E4 1556 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 BCORL1Q5H9F3 1711 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 ABCA6Q8N139 1617 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 ATP7AQ04656 1500 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 CCDC144AA2RUR9 1427 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 PRAG1Q86YV5 1406 aa5.84□□□□□ -1.47
TMOD3-207ENST00000560549 ARID4BQ4LE39 1312 aaPredicted RBP5.84□□□□□ -1.47
TMOD3-207ENST00000560549 INO80Q9ULG1 1556 aaPredicted RBP5.84□□□□□ -1.48
TMOD3-207ENST00000560549 STK10O94804 968 aaKnown RBP5.83□□□□□ -1.48
TMOD3-207ENST00000560549 SSBP05455 408 aaKnown RBP eCLIP5.83□□□□□ -1.48
TMOD3-207ENST00000560549 GSTM1P09488 218 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 TMEM253P0C7T8 217 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 MSL3P1P0C860 447 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 ATG14Q6ZNE5 492 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 ZNF605Q86T29 641 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 OR6P1Q8NGX9 317 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 HNRNPLLQ8WVV9 542 aaKnown RBP5.83□□□□□ -1.48
TMOD3-207ENST00000560549 ANAPC16Q96DE5 110 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 ZDHHC15Q96MV8 337 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 PIF1Q9H611 641 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 PHAXQ9H814 394 aaKnown RBP5.83□□□□□ -1.48
TMOD3-207ENST00000560549 CRTAC1Q9NQ79 661 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 APEX2Q9UBZ4 518 aa5.83□□□□□ -1.48
TMOD3-207ENST00000560549 PTPRTO14522 1441 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms