RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 KRT32Q14532 448 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 IQSEC1Q6DN90 963 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 MCF2L2Q86YR7 1114 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 DNERQ8NFT8 737 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 AMNQ9BXJ7 453 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 SEZ6LQ9BYH1 1024 aa17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 MRPL11Q9Y3B7 192 aaKnown RBP17.63■□□□□ 0.41
SNRPA1-210ENST00000560383 CALML3P27482 149 aa17.62■□□□□ 0.41
SNRPA1-210ENST00000560383 HSPA4P34932 840 aa17.62■□□□□ 0.41
SNRPA1-210ENST00000560383 ADCK5Q3MIX3 580 aa17.62■□□□□ 0.41
SNRPA1-210ENST00000560383 ZNF697Q5TEC3 545 aa17.62■□□□□ 0.41
SNRPA1-210ENST00000560383 TAPT1Q6NXT6 567 aa17.62■□□□□ 0.41
SNRPA1-210ENST00000560383 FAM126BQ8IXS8 530 aa17.62■□□□□ 0.41
SNRPA1-210ENST00000560383 OPLAHO14841 1288 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 REC8O95072 547 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 TIMP1P01033 207 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 KIF5BP33176 963 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 TRAF1Q13077 416 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 FSCN1Q16658 493 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 NOL8Q76FK4 1167 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 DHX32Q7L7V1 743 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 FBXO16Q8IX29 292 aaPredicted RBP17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 SLC43A3Q8NBI5 491 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 SLC17A8Q8NDX2 589 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 CTCFLQ8NI51 663 aaPredicted RBP17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 TBC1D5Q92609 795 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 RNPC3Q96LT9 517 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 PIGSQ96S52 555 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 LZTS2Q9BRK4 669 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 SPZ1Q9BXG8 430 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 AP5M1Q9H0R1 490 aa17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 DDX49Q9Y6V7 483 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-210ENST00000560383 TMEM265A0A087WTH1 108 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 PNMA6FA0A0J9YX94 578 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 RBM47A0AV96 593 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 CCDC69A6NI79 296 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 TLR3O15455 904 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 ZEB2O60315 1214 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 HMGB1P09429 215 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 CALM1P0DP23 149 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 CALM2P0DP24 149 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 CALM3P0DP25 149 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 SMPD1P17405 629 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 EPHB4P54760 987 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 MFSD5Q6N075 450 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 SAMD3Q8N6K7 520 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 SYTL5Q8TDW5 730 aaPredicted RBP17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 VTI1AQ96AJ9 217 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 GUCD1Q96NT3 240 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 MPHOSPH6Q99547 160 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 MYL10Q9BUA6 226 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 MAP3K20Q9NYL2 800 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 PCDHA1Q9Y5I3 950 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 MYH6P13533 1939 aa17.6■□□□□ 0.41
SNRPA1-210ENST00000560383 CD4P01730 458 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 GNAQP50148 359 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 HSD17B4P51659 736 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 BEX3Q00994 111 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 DUSP28Q4G0W2 176 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 NFXL1Q6ZNB6 911 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 HOMER1Q86YM7 354 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 LRRC2Q9BYS8 371 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 PDGFCQ9NRA1 345 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 COL20A1Q9P218 1284 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 SLC12A7Q9Y666 1083 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 PRUNE2Q8WUY3 3088 aa17.59■□□□□ 0.41
SNRPA1-210ENST00000560383 B4DLN1 442 aa17.58■□□□□ 0.4
SNRPA1-210ENST00000560383 MRPL12P52815 198 aaKnown RBP17.58■□□□□ 0.4
SNRPA1-210ENST00000560383 PPIGQ13427 754 aaKnown RBP eCLIP17.58■□□□□ 0.4
SNRPA1-210ENST00000560383 CXCL17Q6UXB2 119 aa17.58■□□□□ 0.4
SNRPA1-210ENST00000560383 EEPD1Q7L9B9 569 aa17.58■□□□□ 0.4
SNRPA1-210ENST00000560383 TAAR1Q96RJ0 339 aa17.58■□□□□ 0.4
SNRPA1-210ENST00000560383 SNX14Q9Y5W7 946 aa17.58■□□□□ 0.4
SNRPA1-210ENST00000560383 DYNC1LI2O43237 492 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-210ENST00000560383 PDE4DQ08499 809 aa17.57■□□□□ 0.4
SNRPA1-210ENST00000560383 APOA5Q6Q788 366 aa17.57■□□□□ 0.4
SNRPA1-210ENST00000560383 FBXL16Q8N461 479 aa17.57■□□□□ 0.4
SNRPA1-210ENST00000560383 TMEM199Q8N511 208 aa17.57■□□□□ 0.4
SNRPA1-210ENST00000560383 SRBD1Q8N5C6 995 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-210ENST00000560383 FANCBQ8NB91 859 aa17.57■□□□□ 0.4
SNRPA1-210ENST00000560383 NSUN6Q8TEA1 469 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-210ENST00000560383 IWS1Q96ST2 819 aa17.57■□□□□ 0.4
SNRPA1-210ENST00000560383 NKRFO15226 690 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNRPA1-210ENST00000560383 PLEKHA8P1O95397 391 aa17.56■□□□□ 0.4
SNRPA1-210ENST00000560383 CPT1AP50416 773 aa17.56■□□□□ 0.4
SNRPA1-210ENST00000560383 ITGA7Q13683 1181 aa17.56■□□□□ 0.4
SNRPA1-210ENST00000560383 TMTC3Q6ZXV5 915 aa17.56■□□□□ 0.4
SNRPA1-210ENST00000560383 RRP36Q96EU6 259 aaKnown RBP17.56■□□□□ 0.4
SNRPA1-210ENST00000560383 TCEANC2Q96MN5 208 aa17.56■□□□□ 0.4
SNRPA1-210ENST00000560383 RMDN3Q96TC7 470 aa17.56■□□□□ 0.4
SNRPA1-210ENST00000560383 WDR11Q9BZH6 1224 aa17.56■□□□□ 0.4
SNRPA1-210ENST00000560383 SCN10AQ9Y5Y9 1956 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 GRIN2DO15399 1336 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 CFBP00751 764 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 RXRAP19793 462 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 RCAN1P53805 252 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 TMEM63BQ5T3F8 832 aa17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 PSRC1Q6PGN9 363 aaPredicted RBP17.55■□□□□ 0.4
SNRPA1-210ENST00000560383 FAM161BQ96MY7 647 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms