RNA–Protein interactions for RNA: ENST00000560217.5

PSMA4-219, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5 BASIC

Gene PSMA4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-219ENST00000560217 ACLYP53396 1101 aa13.54□□□□□ -0.24
PSMA4-219ENST00000560217 NKX3-2P78367 333 aa13.54□□□□□ -0.24
PSMA4-219ENST00000560217 FGD1P98174 961 aa13.54□□□□□ -0.24
PSMA4-219ENST00000560217 Q6ZUG5 572 aa13.54□□□□□ -0.24
PSMA4-219ENST00000560217 TMTC3Q6ZXV5 915 aa13.54□□□□□ -0.24
PSMA4-219ENST00000560217 IWS1Q96ST2 819 aa13.54□□□□□ -0.24
PSMA4-219ENST00000560217 WDR11Q9BZH6 1224 aa13.54□□□□□ -0.24
PSMA4-219ENST00000560217 UPF3AQ9H1J1 476 aaKnown RBP13.54□□□□□ -0.24
PSMA4-219ENST00000560217 ZMYND8Q9ULU4 1186 aaPredicted RBP13.54□□□□□ -0.24
PSMA4-219ENST00000560217 FRMPD3Q5JV73 1810 aa13.54□□□□□ -0.24
PSMA4-219ENST00000560217 MCM3APO60318 1980 aa13.54□□□□□ -0.24
PSMA4-219ENST00000560217 BAZ2BQ9UIF8 2168 aaKnown RBP13.54□□□□□ -0.24
PSMA4-219ENST00000560217 KLF18A0A0U1RQI7 1052 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 A0A1W2PQ45 241 aaPredicted RBP13.53□□□□□ -0.24
PSMA4-219ENST00000560217 A0A1W2PQY0 241 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 hCG_1642624A0A1W2PR95 340 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 RBM47A0AV96 593 aaKnown RBP13.53□□□□□ -0.24
PSMA4-219ENST00000560217 GCOM1H8Y6P7 765 aaPredicted RBP13.53□□□□□ -0.24
PSMA4-219ENST00000560217 ZBTB43O43298 467 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 POLR2MP0CAP2 368 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 RPS6KB1P23443 525 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 RTP1P59025 263 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 DUSP28Q4G0W2 176 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 ARHGEF16Q5VV41 709 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 SAMD3Q8N6K7 520 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 PCSK9Q8NBP7 692 aaKnown RBP13.53□□□□□ -0.24
PSMA4-219ENST00000560217 AP5M1Q9H0R1 490 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 SEC63Q9UGP8 760 aaKnown RBP13.53□□□□□ -0.24
PSMA4-219ENST00000560217 COLQQ9Y215 455 aaPredicted RBP13.53□□□□□ -0.24
PSMA4-219ENST00000560217 Q9Y3F1 56 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 CEP290O15078 2479 aa13.53□□□□□ -0.24
PSMA4-219ENST00000560217 LCTP09848 1927 aa13.52□□□□□ -0.24
PSMA4-219ENST00000560217 MOXD2PA6NHM9 499 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 ASGR1P07306 291 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 NR3C2P08235 984 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 SYN1P17600 705 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 EIF2AK2P19525 551 aaKnown RBP13.52□□□□□ -0.25
PSMA4-219ENST00000560217 CASTP20810 708 aaKnown RBP13.52□□□□□ -0.25
PSMA4-219ENST00000560217 BEX3Q00994 111 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 APOBRQ0VD83 1088 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 SNX17Q15036 470 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 STXBP2Q15833 593 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 RTN1Q16799 776 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 C1orf53Q5VUE5 145 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 TLK2Q86UE8 772 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 FCHSD1Q86WN1 690 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 FBXL16Q8N461 479 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 BRF1Q92994 677 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 ZSWIM6Q9HCJ5 1215 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 STARD7Q9NQZ5 370 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 PXMP2Q9NR77 195 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 FAM217BQ9NTX9 383 aaPredicted RBP13.52□□□□□ -0.25
PSMA4-219ENST00000560217 RBM28Q9NW13 759 aaKnown RBP13.52□□□□□ -0.25
PSMA4-219ENST00000560217 NAP1L2Q9ULW6 460 aaPredicted RBP13.52□□□□□ -0.25
PSMA4-219ENST00000560217 ATP11BQ9Y2G3 1177 aa13.52□□□□□ -0.25
PSMA4-219ENST00000560217 GOLGA8AA7E2F4 631 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 GOLGA8BA8MQT2 603 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 TXNP10599 105 aaKnown RBP13.51□□□□□ -0.25
PSMA4-219ENST00000560217 RCAN1P53805 252 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 FUT2Q10981 343 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 FSCN1Q16658 493 aaKnown RBP13.51□□□□□ -0.25
PSMA4-219ENST00000560217 TRIM60Q495X7 471 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 SEPT14Q6ZU15 432 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 RUFY3Q7L099 469 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 SCFD2Q8WU76 684 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 GLT1D1Q96MS3 346 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 AGXT2Q9BYV1 514 aa13.51□□□□□ -0.25
PSMA4-219ENST00000560217 ELP1O95163 1332 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
PSMA4-219ENST00000560217 MYCLP12524 364 aaPredicted RBP13.5□□□□□ -0.25
PSMA4-219ENST00000560217 CDC27P30260 824 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 ADD1P35611 737 aaKnown RBP13.5□□□□□ -0.25
PSMA4-219ENST00000560217 TLE2Q04725 743 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 TTLL4Q14679 1199 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 PPP2R5BQ15173 497 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 CCDC62Q6P9F0 684 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 USP17L6PQ6QN14 398 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 CXCL17Q6UXB2 119 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 VSIG10LQ86VR7 867 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 VTI1AQ96AJ9 217 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 PDCD2LQ9BRP1 358 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 TM6SF1Q9BZW5 370 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 PCDH10Q9P2E7 1040 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 V9GY48 417 aaPredicted RBP13.5□□□□□ -0.25
PSMA4-219ENST00000560217 ALPK3Q96L96 1907 aa13.5□□□□□ -0.25
PSMA4-219ENST00000560217 MYH6P13533 1939 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 PIK3CDO00329 1044 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 MEIS2O14770 477 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 NKRFO15226 690 aaKnown RBP eCLIP13.49□□□□□ -0.25
PSMA4-219ENST00000560217 ZEB2O60315 1214 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 ARIH2O95376 493 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 METAP2P50579 478 aaKnown RBP eCLIP13.49□□□□□ -0.25
PSMA4-219ENST00000560217 PGM5Q15124 567 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 COPS5Q92905 334 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
PSMA4-219ENST00000560217 PRO3102Q9H379 93 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 PSTPIP2Q9H939 334 aa13.49□□□□□ -0.25
PSMA4-219ENST00000560217 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms