RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 STARD13Q9Y3M8 1113 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 SYNGAP1Q96PV0 1343 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 WDR33Q9C0J8 1336 aaKnown RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 RGS12O14924 1447 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 PLCH2O75038 1416 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 ZFYVE9O95405 1425 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 EFCAB6Q5THR3 1501 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 ZFYVE16Q7Z3T8 1539 aa6.14□□□□□ -1.43
TPM1-222ENST00000560131 CLTCQ00610 1675 aaKnown RBP6.14□□□□□ -1.43
TPM1-222ENST00000560131 KNDC1Q76NI1 1749 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 TRAV20A0A0B4J274 112 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 RGS13O14921 159 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 PDE8AO60658 829 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 RAPGEF3O95398 923 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 ADCY5O95622 1261 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 GSPT1P15170 499 aaKnown RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 ELNP15502 786 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 AFF1P51825 1210 aaKnown RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 ERVK-24P63145 666 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 PKP1Q13835 747 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 BRDTQ58F21 947 aaPredicted RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 AKAP4Q5JQC9 854 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 FAM209AQ5JX71 171 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 SLC6A19Q695T7 634 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 ZNF771Q7L3S4 317 aaPredicted RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 CERS3Q8IU89 383 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 WFDC8Q8IUA0 241 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 RPAP2Q8IXW5 612 aaPredicted RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 KRT222Q8N1A0 295 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 FAM13CQ8NE31 585 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 FAM126AQ9BYI3 521 aaPredicted RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 API5Q9BZZ5 524 aaKnown RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 GEMIN8Q9NWZ8 242 aaKnown RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 SUCOQ9UBS9 1254 aaKnown RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 TJP2Q9UDY2 1190 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 MCM8Q9UJA3 840 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 MAPRE3Q9UPY8 281 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 MRPS23Q9Y3D9 190 aaKnown RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 RAD50Q92878 1312 aa6.13□□□□□ -1.43
TPM1-222ENST00000560131 RPAP1Q9BWH6 1393 aaPredicted RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 CPSF1Q10570 1443 aaKnown RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 CDK12Q9NYV4 1490 aaPredicted RBP6.13□□□□□ -1.43
TPM1-222ENST00000560131 TRBV23-1A0A0A0MS06 115 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 MROH2AA6NES4 1674 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 ERC2O15083 957 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 FANCGO15287 622 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 NEMFO60524 1076 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 LILRB5O75023 590 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 AOC2O75106 756 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 CAVIN2O95810 425 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 TUBB4AP04350 444 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 U2AF2P26368 475 aaKnown RBP eCLIP6.12□□□□□ -1.43
TPM1-222ENST00000560131 POLR2BP30876 1174 aaKnown RBP6.12□□□□□ -1.43
TPM1-222ENST00000560131 UBE2HP62256 183 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 PPM1JQ5JR12 505 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 CCDC171Q6TFL3 1326 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 CFAP65Q6ZU64 1925 aaKnown RBP6.12□□□□□ -1.43
TPM1-222ENST00000560131 RNF180Q86T96 592 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 HID1Q8IV36 788 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 SIRT2Q8IXJ6 389 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 TMEM192Q8IY95 271 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 PHACTR4Q8IZ21 702 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 ARHGEF28Q8N1W1 1705 aaKnown RBP6.12□□□□□ -1.43
TPM1-222ENST00000560131 ZGPATQ8N5A5 531 aaKnown RBP6.12□□□□□ -1.43
TPM1-222ENST00000560131 MROH1Q8NDA8 1641 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 ZNF397Q8NF99 534 aaPredicted RBP6.12□□□□□ -1.43
TPM1-222ENST00000560131 KIF18AQ8NI77 898 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 TMX3Q96JJ7 454 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 TMEM87BQ96K49 555 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 CLUHP3Q96NS8 147 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 WDR18Q9BV38 432 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 CARD10Q9BWT7 1032 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 MRPL4Q9BYD3 311 aaKnown RBP6.12□□□□□ -1.43
TPM1-222ENST00000560131 ARHGEF4Q9NR80 690 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 PICK1Q9NRD5 415 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 RAD18Q9NS91 495 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 INTS7Q9NVH2 962 aaKnown RBP6.12□□□□□ -1.43
TPM1-222ENST00000560131 SUSD2Q9UGT4 822 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 TCEAL9Q9UHQ7 104 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 RRP7AQ9Y3A4 280 aaKnown RBP6.12□□□□□ -1.43
TPM1-222ENST00000560131 PCDHGC5Q9Y5F6 944 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 ATP6V1DQ9Y5K8 247 aa6.12□□□□□ -1.43
TPM1-222ENST00000560131 ATP10DQ9P241 1426 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 RPGRIP1LQ68CZ1 1315 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 DNAJC25-GNG10A0A024R161 153 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 LOC100289279A0A1B0GTE1 492 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 GSG1L2A8MUP6 293 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 KIF2AO00139 706 aaPredicted RBP6.11□□□□□ -1.43
TPM1-222ENST00000560131 TM4SF5O14894 197 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 MCCP23508 829 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 GBP1P32455 592 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 NLRP12P59046 1061 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 MUM1L1Q5H9M0 696 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 ZBTB37Q5TC79 503 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 MSL1Q68DK7 614 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 MAP4K3Q8IVH8 894 aa6.11□□□□□ -1.43
TPM1-222ENST00000560131 MRPL41Q8IXM3 137 aaKnown RBP6.11□□□□□ -1.43
TPM1-222ENST00000560131 UBR7Q8N806 425 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms