RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 MPHOSPH10O00566 681 aaKnown RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 TBX3O15119 743 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 SLC37A4O43826 429 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 EDIL3O43854 480 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 KIF5CO60282 957 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 ECE2O60344 883 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 PPP1R11O60927 126 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 TADA3O75528 432 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 URI1O94763 535 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 TDP2O95551 362 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 H2AFXP16104 143 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 CYP3A7P24462 503 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 KRT9P35527 623 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 TXKP42681 527 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 TNNI2P48788 182 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 MMP14P50281 582 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 UBXN1Q04323 297 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 LRRC63Q05C16 580 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 ELF2Q15723 593 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 PTPN21Q16825 1174 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 CERKLQ49MI3 558 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 CENPPQ6IPU0 288 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 ZNF662Q6ZS27 426 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 ZSCAN29Q8IWY8 852 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 SMAP1Q8IYB5 467 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 CSGALNACT2Q8N6G5 542 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 GMCL1P1Q8NEA9 526 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 OR8K1Q8NGG5 319 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 ZNF622Q969S3 477 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 KIFC2Q96AC6 838 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 GMCL1Q96IK5 515 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 ERGIC2Q96RQ1 377 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 NUP88Q99567 741 aaPredicted RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 DNAJC7Q99615 494 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 SGIP1Q9BQI5 828 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 TUBGCP2Q9BSJ2 902 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 MTFR1LQ9H019 292 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 DNAJC18Q9H819 358 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 OGFRQ9NZT2 677 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 FAM198AQ9UFP1 575 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 LUC7L2Q9Y383 392 aaKnown RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 MRFAP1Q9Y605 127 aa9.04□□□□□ -0.96
SMAD3-212ENST00000559937 RBBP6Q7Z6E9 1792 aaKnown RBP9.04□□□□□ -0.96
SMAD3-212ENST00000559937 USP17L10C9JJH3 530 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 FOSP01100 380 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 EEF2P13639 858 aaKnown RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 PMS1P54277 932 aaKnown RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 EIF6P56537 245 aaKnown RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 CDK17Q00537 523 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 EHHADHQ08426 723 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 NFIAQ12857 509 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 MTF1Q14872 753 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 MEA1Q16626 185 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 TSR1Q2NL82 804 aaKnown RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 QRICH1Q2TAL8 776 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 SLFN13Q68D06 897 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 TTBK2Q6IQ55 1244 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 BTNL9Q6UXG8 535 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 ARHGAP27Q6ZUM4 889 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 CLEC10AQ8IUN9 316 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 KCTD17Q8N5Z5 321 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 SNX29Q8TEQ0 813 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 CPLX3Q8WVH0 158 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 UBXN4Q92575 508 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 CNOT6LQ96LI5 555 aaKnown RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 WDR24Q96S15 920 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 PLIN2Q99541 437 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 MXD3Q9BW11 206 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 PSTPIP2Q9H939 334 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 MRPL44Q9H9J2 332 aaKnown RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 DBNDD1Q9H9R9 158 aa9.03□□□□□ -0.96
SMAD3-212ENST00000559937 ARGLU1Q9NWB6 273 aaPredicted RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 DDX25Q9UHL0 483 aaKnown RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 HERC5Q9UII4 1024 aaKnown RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 DDX41Q9UJV9 622 aaKnown RBP9.03□□□□□ -0.96
SMAD3-212ENST00000559937 DDTLA6NHG4 134 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-212ENST00000559937 MYMKA6NI61 221 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 FANCGO15287 622 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 ATP8B1O43520 1251 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 KIF20AO95235 890 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 CYLC1P35663 651 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-212ENST00000559937 SLC1A4P43007 532 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 MTIF2P46199 727 aaKnown RBP9.02□□□□□ -0.97
SMAD3-212ENST00000559937 ERVK-24P63145 666 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 ZBED6P86452 979 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 ICA1Q05084 483 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 PPP2R3AQ06190 1150 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 STK4Q13043 487 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 MCM6Q14566 821 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 NAA30Q147X3 362 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-212ENST00000559937 CDC37Q16543 378 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-212ENST00000559937 UBE2SQ16763 222 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 ABCB5Q2M3G0 1257 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 ARHGAP29Q52LW3 1261 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 FKBP15Q5T1M5 1219 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 ANKRD40Q6AI12 368 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 KIAA0825Q8IV33 1275 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 SLFN12Q8IYM2 578 aa9.02□□□□□ -0.97
SMAD3-212ENST00000559937 GPR161Q8N6U8 529 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms