RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 SLC30A10Q6XR72 485 aa10.75□□□□□ -0.69
HDDC3-204ENST00000559834 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
HDDC3-204ENST00000559834 MCF2L2Q86YR7 1114 aa10.75□□□□□ -0.69
HDDC3-204ENST00000559834 PHOSPHO2Q8TCD6 241 aa10.75□□□□□ -0.69
HDDC3-204ENST00000559834 CCDC171Q6TFL3 1326 aa10.75□□□□□ -0.69
HDDC3-204ENST00000559834 PITPNM1O00562 1244 aa10.74□□□□□ -0.69
HDDC3-204ENST00000559834 IQCF3P0C7M6 154 aa10.74□□□□□ -0.69
HDDC3-204ENST00000559834 RRP1P56182 461 aaKnown RBP10.74□□□□□ -0.69
HDDC3-204ENST00000559834 AAK1Q2M2I8 961 aa10.74□□□□□ -0.69
HDDC3-204ENST00000559834 CCDC155Q8N6L0 562 aa10.74□□□□□ -0.69
HDDC3-204ENST00000559834 NSUN6Q8TEA1 469 aaKnown RBP10.74□□□□□ -0.69
HDDC3-204ENST00000559834 SLC9A7Q96T83 725 aa10.74□□□□□ -0.69
HDDC3-204ENST00000559834 FTOQ9C0B1 505 aaKnown RBP eCLIP10.74□□□□□ -0.69
HDDC3-204ENST00000559834 RWDD1Q9H446 243 aaPredicted RBP10.74□□□□□ -0.69
HDDC3-204ENST00000559834 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
HDDC3-204ENST00000559834 GOLGA8HP0CJ92 632 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 MYOGP15173 224 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 SDSP20132 328 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 CASTP20810 708 aaKnown RBP10.73□□□□□ -0.69
HDDC3-204ENST00000559834 STXBP2Q15833 593 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 USH1GQ495M9 461 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 ZNF589Q86UQ0 364 aaPredicted RBP10.73□□□□□ -0.69
HDDC3-204ENST00000559834 COPS5Q92905 334 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 IWS1Q96ST2 819 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 CRBNQ96SW2 442 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 LNPKQ9C0E8 428 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 UBA5Q9GZZ9 404 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 MRPL11Q9Y3B7 192 aaKnown RBP10.73□□□□□ -0.69
HDDC3-204ENST00000559834 ABCB11O95342 1321 aa10.73□□□□□ -0.69
HDDC3-204ENST00000559834 HIP1O00291 1037 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 BAIAP3O94812 1187 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 PARNO95453 639 aaKnown RBP10.72□□□□□ -0.69
HDDC3-204ENST00000559834 GH1P01241 217 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 POU3F3P20264 500 aaPredicted RBP10.72□□□□□ -0.69
HDDC3-204ENST00000559834 CHMP4BP1P59074 171 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 SKIV2LQ15477 1246 aaKnown RBP10.72□□□□□ -0.69
HDDC3-204ENST00000559834 CDC37Q16543 378 aaPredicted RBP10.72□□□□□ -0.69
HDDC3-204ENST00000559834 PTGISQ16647 500 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 ASPRV1Q53RT3 343 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 SEPT14Q6ZU15 432 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 PNMA1Q8ND90 353 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 CAGE1Q8TC20 777 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 ADAMTS19Q8TE59 1207 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 ANKS1AQ92625 1134 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 VWCEQ96DN2 955 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 ZKSCAN3Q9BRR0 538 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 CTNNA3Q9UI47 895 aa10.72□□□□□ -0.69
HDDC3-204ENST00000559834 DHX16O60231 1041 aaKnown RBP10.71□□□□□ -0.69
HDDC3-204ENST00000559834 KDM4AO75164 1064 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 CA3P07451 260 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 PARP1P09874 1014 aaKnown RBP10.71□□□□□ -0.69
HDDC3-204ENST00000559834 KCNJ6P48051 423 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 DGKDQ16760 1214 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 IMMTQ16891 758 aaKnown RBP10.71□□□□□ -0.69
HDDC3-204ENST00000559834 ARHGEF16Q5VV41 709 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 CCDC62Q6P9F0 684 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 CWC27Q6UX04 472 aaKnown RBP10.71□□□□□ -0.69
HDDC3-204ENST00000559834 SESTD1Q86VW0 696 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 FBXO11Q86XK2 927 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 TBC1D10CQ8IV04 446 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 HERC6Q8IVU3 1022 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 ADGRF4Q8IZF3 695 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 MICALL1Q8N3F8 863 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 SYTL5Q8TDW5 730 aaPredicted RBP10.71□□□□□ -0.69
HDDC3-204ENST00000559834 AFG1LQ8WV93 481 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 TAAR1Q96RJ0 339 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 ZSCAN10Q96SZ4 725 aaPredicted RBP10.71□□□□□ -0.69
HDDC3-204ENST00000559834 UHRF1Q96T88 793 aaPredicted RBP10.71□□□□□ -0.69
HDDC3-204ENST00000559834 RMDN3Q96TC7 470 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 KRT23Q9C075 422 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 DIAPH3Q9NSV4 1193 aa10.71□□□□□ -0.69
HDDC3-204ENST00000559834 EIF3JO75822 258 aaKnown RBP10.7□□□□□ -0.7
HDDC3-204ENST00000559834 ARIH2O95376 493 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 MMP3P08254 477 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 LAMC2Q13753 1193 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 LY6KQ17RY6 165 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 B4GALNT3Q6L9W6 998 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 CHST3Q7LGC8 479 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 SMC5Q8IY18 1101 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 SAMD3Q8N6K7 520 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 C7orf31Q8N865 590 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 AFAP1L1Q8TED9 768 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 TBC1D5Q92609 795 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 UBAC1Q9BSL1 405 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 DSCC1Q9BVC3 393 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 KATNAL1Q9BW62 490 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 CPVLQ9H3G5 476 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 OSBPL3Q9H4L5 887 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 CNNM2Q9H8M5 875 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 VAT1LQ9HCJ6 419 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 MAP3K20Q9NYL2 800 aaKnown RBP10.7□□□□□ -0.7
HDDC3-204ENST00000559834 ZSWIM5Q9P217 1185 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 COG5Q9UP83 839 aa10.7□□□□□ -0.7
HDDC3-204ENST00000559834 TTC28Q96AY4 2481 aa10.69□□□□□ -0.7
HDDC3-204ENST00000559834 NEDD4P46934 1319 aa10.69□□□□□ -0.7
HDDC3-204ENST00000559834 B4E1Z4 1266 aa10.69□□□□□ -0.7
HDDC3-204ENST00000559834 TLL1O43897 1013 aa10.69□□□□□ -0.7
HDDC3-204ENST00000559834 EFCAB14O75071 495 aa10.69□□□□□ -0.7
HDDC3-204ENST00000559834 NR3C2P08235 984 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms