RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CTR9Q6PD62 1173 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 C16orf86Q6ZW13 317 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 SLC17A8Q8NDX2 589 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 MAML3Q96JK9 1138 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 GUCD1Q96NT3 240 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 TANGO6Q9C0B7 1094 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 ATP8A2Q9NTI2 1148 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 MAP10Q9P2G4 905 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 SWAP70Q9UH65 585 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 IVNS1ABPQ9Y6Y0 642 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 VCANP13611 3396 aa6.99□□□□□ -1.29
USP3-215ENST00000559771 DLL1O00548 723 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 WDR46O15213 610 aaKnown RBP6.98□□□□□ -1.29
USP3-215ENST00000559771 SEPT4O43236 478 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 SMARCA5O60264 1052 aaPredicted RBP6.98□□□□□ -1.29
USP3-215ENST00000559771 MSCO60682 206 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 RAB11FIP3O75154 756 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 FLOT1O75955 427 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 PGK2P07205 417 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 TAL1P17542 331 aaPredicted RBP6.98□□□□□ -1.29
USP3-215ENST00000559771 ITGB8P26012 769 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 CTHP32929 405 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 RTP1P59025 263 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 ICA1Q05084 483 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 ZNF792Q3KQV3 632 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 LYPD8Q6UX82 237 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 SLC39A5Q6ZMH5 540 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 DPP9Q86TI2 863 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 ABRAQ8N0Z2 381 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 CCDC17Q96LX7 622 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 MROH8Q9H579 483 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 ZNF214Q9UL59 606 aaPredicted RBP6.98□□□□□ -1.29
USP3-215ENST00000559771 DDX19BQ9UMR2 479 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 STXBP5LQ9Y2K9 1186 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 PRUNE2Q8WUY3 3088 aa6.98□□□□□ -1.29
USP3-215ENST00000559771 IGKV6D-41A0A0C4DH26 115 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 TRIM43BA6NCK2 446 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 GSG1L2A8MUP6 293 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 VWA5AO00534 786 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 HMMRO75330 724 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 ZNF865P0CJ78 1059 aaPredicted RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 RASA1P20936 1047 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 LRRC41Q15345 812 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 SHHQ15465 462 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 TRIM60Q495X7 471 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 FAM47AQ5JRC9 791 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 C9orf50Q5SZB4 431 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 C1orf53Q5VUE5 145 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 FAM109BQ6ICB4 259 aaPredicted RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 VASH1Q7L8A9 365 aaPredicted RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 BPHLQ86WA6 291 aaPredicted RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 NCAPG2Q86XI2 1143 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 RIOX2Q8IUF8 465 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 MB21D1Q8N884 522 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 OSBP2Q969R2 916 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 TRIM43Q96BQ3 446 aaPredicted RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 LENG1Q96BZ8 264 aaPredicted RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 STRBPQ96SI9 672 aaKnown RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 NUP88Q99567 741 aaPredicted RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 BCL11AQ9H165 835 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 ARHGEF10LQ9HCE6 1279 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 CWC22Q9HCG8 908 aaKnown RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 EPB41L4AQ9HCS5 686 aaPredicted RBP6.97□□□□□ -1.29
USP3-215ENST00000559771 PDLIM7Q9NR12 457 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 PPP1R9AQ9ULJ8 1098 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 RIPK3Q9Y572 518 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 SLC4A4Q9Y6R1 1079 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 MYH4Q9Y623 1939 aa6.97□□□□□ -1.29
USP3-215ENST00000559771 ROBO3Q96MS0 1386 aa6.96□□□□□ -1.29
USP3-215ENST00000559771 DNAJC25-GNG10A0A024R161 153 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 ADCY6O43306 1168 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 SNAI1O95863 264 aaPredicted RBP6.96□□□□□ -1.3
USP3-215ENST00000559771 FCER1AP12319 257 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 ADCYAP1R1P41586 468 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 EPHB4P54760 987 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 RELBQ01201 579 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 PLS1Q14651 629 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 SBK1Q52WX2 424 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 FAM83BQ5T0W9 1011 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 TSHZ3Q63HK5 1081 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 ARRDC4Q8NCT1 418 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 BADQ92934 168 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 GMCL1Q96IK5 515 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 FGD4Q96M96 766 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 TINF2Q9BSI4 451 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 OXCT2Q9BYC2 517 aaPredicted RBP6.96□□□□□ -1.3
USP3-215ENST00000559771 KRTAP4-11Q9BYQ6 195 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.96□□□□□ -1.31e-6■■■■□ 21.2
USP3-215ENST00000559771 KANSL2Q9H9L4 492 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 POLMQ9NP87 494 aaPredicted RBP6.96□□□□□ -1.3
USP3-215ENST00000559771 PHF24Q9UPV7 400 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 ATP11BQ9Y2G3 1177 aa6.96□□□□□ -1.3
USP3-215ENST00000559771 CHD9Q3L8U1 2897 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 F5H6K3 240 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 M0R2C6 588 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 FOXP2O15409 715 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 ADAMTS4O75173 837 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 SLC25A27O95847 323 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 NDUFB10O96000 172 aa6.95□□□□□ -1.3
USP3-215ENST00000559771 PGK1P00558 417 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms