RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ZNF157P51786 506 aaPredicted RBP19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 GHRHRQ02643 423 aa19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 LENG9Q96B70 501 aa19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 RBPJLQ9UBG7 517 aa19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 HPSEQ9Y251 543 aa19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 BMP15O95972 392 aa19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 OR52Z1P0C646 297 aa19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 ZBTB48P10074 688 aaPredicted RBP19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 FAM160A1Q05DH4 1040 aa19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 BAATQ14032 418 aaPredicted RBP19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 Q3C1V9 767 aa19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 SYMPKQ92797 1274 aaKnown RBP19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 DDX25Q9UHL0 483 aaKnown RBP19.67■□□□□ 0.74
CHRNA3-206ENST00000559658 SYCE3A1L190 88 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 FOSP01100 380 aaPredicted RBP19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 PPP4R3AQ6IN85 833 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 RNF207Q6ZRF8 634 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 CCDC73Q6ZRK6 1079 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 SMC1BQ8NDV3 1235 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 HAS1Q92839 578 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 FERMT2Q96AC1 680 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 MTMR9Q96QG7 549 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 TAAR1Q96RJ0 339 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 SPATC1LQ9H0A9 340 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 A1CFQ9NQ94 594 aaKnown RBP19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 RPTORQ8N122 1335 aa19.66■□□□□ 0.74
CHRNA3-206ENST00000559658 ERCC4Q92889 916 aaPredicted RBP19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 MOV10L1Q9BXT6 1211 aaKnown RBP19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 PANK2Q9BZ23 570 aa19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 PCNTO95613 3336 aa19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 CALCRLQ16602 461 aa19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 PRR16Q569H4 304 aa19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 CCDC183Q5T5S1 534 aa19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 MCF2L2Q86YR7 1114 aa19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 MBOAT7Q96N66 472 aa19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 ACAD9Q9H845 621 aa19.65■□□□□ 0.74
CHRNA3-206ENST00000559658 IGLV3-22A0A075B6J6 115 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 FAM237AA0A1B0GTK4 181 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 EIF2AK2P19525 551 aaKnown RBP19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 OSBPP22059 807 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 TXKP42681 527 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 USP11P51784 963 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 ARL6IP4Q66PJ3 421 aaKnown RBP19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 RGMBQ6NW40 437 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 PDILTQ8N807 584 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 ZNF579Q8NAF0 562 aaKnown RBP19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 CLSTN2Q9H4D0 955 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 CYP39A1Q9NYL5 469 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 TLL2Q9Y6L7 1015 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 ASTN1O14525 1302 aa19.64■□□□□ 0.73
CHRNA3-206ENST00000559658 CYP3A7-CYP3A51PA0A087WV96 503 aa19.63■□□□□ 0.73
CHRNA3-206ENST00000559658 IGF2BP3O00425 579 aaKnown RBP eCLIP19.63■□□□□ 0.73
CHRNA3-206ENST00000559658 CYP3A7P24462 503 aa19.63■□□□□ 0.73
CHRNA3-206ENST00000559658 TECP42680 631 aa19.63■□□□□ 0.73
CHRNA3-206ENST00000559658 RIOX2Q8IUF8 465 aa19.63■□□□□ 0.73
CHRNA3-206ENST00000559658 MB21D1Q8N884 522 aa19.63■□□□□ 0.73
CHRNA3-206ENST00000559658 ZIC5Q96T25 663 aa19.63■□□□□ 0.73
CHRNA3-206ENST00000559658 NUP62CLQ9H1M0 184 aa19.63■□□□□ 0.73
CHRNA3-206ENST00000559658 KCNH3Q9ULD8 1083 aa19.63■□□□□ 0.73
CHRNA3-206ENST00000559658 POTEMA6NI47 508 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 FAM155AB1AL88 458 aaPredicted RBP19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 ZNF202O95125 648 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 CYP3A4P08684 503 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 PRPHP41219 470 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 PABPC4Q13310 644 aaKnown RBP eCLIP19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 DTHD1Q6ZMT9 781 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 NCAPG2Q86XI2 1143 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 CKAP2LQ8IYA6 745 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 ABT1Q9ULW3 272 aaKnown RBP19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 FRMPD4Q14CM0 1322 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 SLC10A3P09131 477 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 GCFC2P16383 781 aaKnown RBP19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 ERCC3P19447 782 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 CIITAP33076 1130 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 SYKP43405 635 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 ANKRD23Q86SG2 305 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 GAS2L3Q86XJ1 694 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 ETNPPLQ8TBG4 499 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 PORCNQ9H237 461 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 KCNMB3Q9NPA1 279 aa19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 DDX19AQ9NUU7 478 aaKnown RBP19.62■□□□□ 0.73
CHRNA3-206ENST00000559658 LRRC37A2A6NM11 1700 aa19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 LAD1O00515 517 aa19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 MRPS9P82933 396 aaKnown RBP19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 CNTN2Q02246 1040 aa19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 ORC2Q13416 577 aaPredicted RBP19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 LONRF3Q496Y0 759 aa19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 MCTP2Q6DN12 878 aa19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 ANKRD13CQ8N6S4 541 aa19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 ZNF784Q8NCA9 323 aaPredicted RBP19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 SMCR8Q8TEV9 937 aaPredicted RBP19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 LRRC15Q8TF66 581 aa19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 RMDN3Q96TC7 470 aa19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 PNMA2Q9UL42 364 aa19.61■□□□□ 0.73
CHRNA3-206ENST00000559658 A0A087WWV3 80 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 FOXN1O15353 648 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 MSH4O15457 936 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 POLR2DO15514 142 aaKnown RBP19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 TOMM70O94826 608 aa19.6■□□□□ 0.73
CHRNA3-206ENST00000559658 ITGB5P18084 799 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms