RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 AP5M1Q9H0R1 490 aa14.93□□□□□ -0.02
BMP4-208ENST00000559642 PRO3102Q9H379 93 aa14.93□□□□□ -0.02
BMP4-208ENST00000559642 PRDM5Q9NQX1 630 aaPredicted RBP14.93□□□□□ -0.02
BMP4-208ENST00000559642 STARD7Q9NQZ5 370 aa14.93□□□□□ -0.02
BMP4-208ENST00000559642 PXMP2Q9NR77 195 aa14.93□□□□□ -0.02
BMP4-208ENST00000559642 KLF18A0A0U1RQI7 1052 aa14.92□□□□□ -0.02
BMP4-208ENST00000559642 RBM47A0AV96 593 aaKnown RBP14.92□□□□□ -0.02
BMP4-208ENST00000559642 HMGB1P09429 215 aaKnown RBP14.92□□□□□ -0.02
BMP4-208ENST00000559642 PPP2R5BQ15173 497 aa14.92□□□□□ -0.02
BMP4-208ENST00000559642 DUSP28Q4G0W2 176 aa14.92□□□□□ -0.02
BMP4-208ENST00000559642 ARHGEF16Q5VV41 709 aa14.92□□□□□ -0.02
BMP4-208ENST00000559642 SYNE3Q6ZMZ3 975 aa14.92□□□□□ -0.02
BMP4-208ENST00000559642 FANCBQ8NB91 859 aa14.92□□□□□ -0.02
BMP4-208ENST00000559642 PCSK9Q8NBP7 692 aaKnown RBP14.92□□□□□ -0.02
BMP4-208ENST00000559642 COPS5Q92905 334 aa14.92□□□□□ -0.02
BMP4-208ENST00000559642 LZTS2Q9BRK4 669 aa14.92□□□□□ -0.02
BMP4-208ENST00000559642 SEC63Q9UGP8 760 aaKnown RBP14.92□□□□□ -0.02
BMP4-208ENST00000559642 NAP1L2Q9ULW6 460 aaPredicted RBP14.92□□□□□ -0.02
BMP4-208ENST00000559642 CNTNAP5Q8WYK1 1306 aa14.92□□□□□ -0.02
BMP4-208ENST00000559642 DNAH12Q6ZR08 3092 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 GOLGA8AA7E2F4 631 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 GOLGA8BA8MQT2 603 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 B4DLN1 442 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 GCOM1H8Y6P7 765 aaPredicted RBP14.91□□□□□ -0.02
BMP4-208ENST00000559642 ZBTB43O43298 467 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 PQBP1O60828 265 aaKnown RBP14.91□□□□□ -0.02
BMP4-208ENST00000559642 ARIH2O95376 493 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 POLR2MP0CAP2 368 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 SMARCA1P28370 1054 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 MRPL12P52815 198 aaKnown RBP14.91□□□□□ -0.02
BMP4-208ENST00000559642 NKX3-2P78367 333 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 FGD1P98174 961 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 MDM2Q00987 491 aaPredicted RBP14.91□□□□□ -0.02
BMP4-208ENST00000559642 TLE2Q04725 743 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 APOBRQ0VD83 1088 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 TRAF1Q13077 416 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 RTN1Q16799 776 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 C1orf53Q5VUE5 145 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 BLOC1S2Q6QNY1 142 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 CXCL17Q6UXB2 119 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 SEPT14Q6ZU15 432 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 Q6ZUG5 572 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 FCHSD1Q86WN1 690 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 OR6J1Q8NGC5 347 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 IL31RAQ8NI17 732 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 SCFD2Q8WU76 684 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 GLT1D1Q96MS3 346 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 GDF15Q99988 308 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 PDLIM7Q9NR12 457 aa14.91□□□□□ -0.02
BMP4-208ENST00000559642 MYCLP12524 364 aaPredicted RBP14.9□□□□□ -0.02
BMP4-208ENST00000559642 CASTP20810 708 aaKnown RBP14.9□□□□□ -0.02
BMP4-208ENST00000559642 RPS6KB1P23443 525 aa14.9□□□□□ -0.02
BMP4-208ENST00000559642 STXBP2Q15833 593 aa14.9□□□□□ -0.02
BMP4-208ENST00000559642 SH3RF1Q7Z6J0 888 aa14.9□□□□□ -0.02
BMP4-208ENST00000559642 BRF1Q92994 677 aa14.9□□□□□ -0.02
BMP4-208ENST00000559642 VTI1AQ96AJ9 217 aa14.9□□□□□ -0.02
BMP4-208ENST00000559642 ZFP91Q96JP5 570 aaPredicted RBP14.9□□□□□ -0.02
BMP4-208ENST00000559642 IWS1Q96ST2 819 aa14.9□□□□□ -0.02
BMP4-208ENST00000559642 PDCD2LQ9BRP1 358 aa14.9□□□□□ -0.02
BMP4-208ENST00000559642 USP26Q9BXU7 913 aa14.9□□□□□ -0.02
BMP4-208ENST00000559642 Q9Y3F1 56 aa14.9□□□□□ -0.02
BMP4-208ENST00000559642 NR3C2P08235 984 aa14.89□□□□□ -0.03
BMP4-208ENST00000559642 TXNP10599 105 aaKnown RBP14.89□□□□□ -0.03
BMP4-208ENST00000559642 CDC27P30260 824 aa14.89□□□□□ -0.03
BMP4-208ENST00000559642 TTLL4Q14679 1199 aa14.89□□□□□ -0.03
BMP4-208ENST00000559642 PGM5Q15124 567 aa14.89□□□□□ -0.03
BMP4-208ENST00000559642 GPKOWQ92917 476 aaPredicted RBP eCLIP14.89□□□□□ -0.03
BMP4-208ENST00000559642 FAM217BQ9NTX9 383 aaPredicted RBP14.89□□□□□ -0.03
BMP4-208ENST00000559642 RBM28Q9NW13 759 aaKnown RBP14.89□□□□□ -0.03
BMP4-208ENST00000559642 PRKAG2Q9UGJ0 569 aa14.89□□□□□ -0.03
BMP4-208ENST00000559642 ELP1O95163 1332 aa14.89□□□□□ -0.03
BMP4-208ENST00000559642 A0A0U1RQG5 324 aaPredicted RBP14.88□□□□□ -0.03
BMP4-208ENST00000559642 TRIM43BA6NCK2 446 aa14.88□□□□□ -0.03
BMP4-208ENST00000559642 CLTBP09497 229 aa14.88□□□□□ -0.03
BMP4-208ENST00000559642 PSMC6P62333 389 aa14.88□□□□□ -0.03
BMP4-208ENST00000559642 FUT2Q10981 343 aa14.88□□□□□ -0.03
BMP4-208ENST00000559642 LY6KQ17RY6 165 aa14.88□□□□□ -0.03
BMP4-208ENST00000559642 CCDC62Q6P9F0 684 aa14.88□□□□□ -0.03
BMP4-208ENST00000559642 USP17L6PQ6QN14 398 aa14.88□□□□□ -0.03
BMP4-208ENST00000559642 HEATR3Q7Z4Q2 680 aa14.88□□□□□ -0.03
BMP4-208ENST00000559642 SAMD3Q8N6K7 520 aa14.88□□□□□ -0.03
BMP4-208ENST00000559642 TRIM43Q96BQ3 446 aaPredicted RBP14.88□□□□□ -0.03
BMP4-208ENST00000559642 MAP3K20Q9NYL2 800 aaKnown RBP14.88□□□□□ -0.03
BMP4-208ENST00000559642 TRIOBPQ9H2D6 2365 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 NKRFO15226 690 aaKnown RBP eCLIP14.87□□□□□ -0.031e-6■■□□□ 13.5
BMP4-208ENST00000559642 EPB41L2O43491 1005 aaKnown RBP14.87□□□□□ -0.03
BMP4-208ENST00000559642 ZEB2O60315 1214 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 MYL3P08590 195 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 PSMA5P28066 241 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 METAP2P50579 478 aaKnown RBP eCLIP14.87□□□□□ -0.03
BMP4-208ENST00000559642 UBE2SQ16763 222 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 ANKRD33Q7Z3H0 272 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 SMARCC2Q8TAQ2 1214 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 LBHD1Q9BQE6 289 aaPredicted RBP14.87□□□□□ -0.03
BMP4-208ENST00000559642 UBE2OQ9C0C9 1292 aaKnown RBP14.87□□□□□ -0.03
BMP4-208ENST00000559642 MRVI1Q9Y6F6 885 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 GRIN2DO15399 1336 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 FRMPD4Q14CM0 1322 aa14.87□□□□□ -0.03
BMP4-208ENST00000559642 DOCK5Q9H7D0 1870 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms